Transcript Information: R_Transcript_483347.p1


Annotated TAIR IDAT3G08560.1
Annotated Gene Namevacuolar H+-ATPase subunit E isoform 2
Annotated Gene Symbol(s)VHA-E2
Annotation TypeHomolog
Chromosome Positionchr3:2600130-2601907 | Forward length=235
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53016899038602
Replicate 21.1325805203812
Replicate 31.2356331483402
Condition 2: 8 Hour
Replicate 10
Replicate 20.46391871039804
Replicate 30.22595365917494
Condition 3: 24 Hour
Replicate 10.28578183271001
Replicate 20.36606238822535
Replicate 30.36328140559166


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483347.p1 GENE.R_Transcript_483347~~R_Transcript_483347.p1 ORF type:5prime_partial len:241 (+),score=19.62,vATP-synt_E|PF01991.14|1.2e-62 R_Transcript_483347:3-725(+)
AAAGAGATAGCAAACATGGCGATGTCAGAAGATGAAGTCCAACAACAATTACACAATATGGTAAACTTCATTCATAAAGAGGCACAAGAAAAGGCACAAGAAATTCGAATCAAAGCTGAAGAGGAATACAACATTGAAAAGACAAACATCGTTCAAGAACAAAAGAAAAAAATTAACTCTGAATTTGAAGAGAAAATGAAAAAAGTCGAAGTCTCACGAAAAATTGCGCAATCGAATCAATTAAATCAATGCCGTCTTGCTATTTTACGAGCTCGCGAAACTGCAATTCAACAAATCTTCACTGAAGCGCAAGAAAGATTATTATCGCTCACTAACGACAAAAATCGATATGTCAAAATGCTCGAAAAATTGATTTTACAAGGACTTTTGAAACTCAAAGAGCAAGAAGTTCAAATTCTTTGCCGAGCTGAAGATCACGAATTAGTCGTCAAAGCTGTCCCAGAAGCCATTCGATTATACAGAGATAAATCAGGAATCCAAGCCAGTATTGAAGTCGTTGAAAAACACAGACTCGCTCCTGGACCACAACCCGGTAACAAAGGCGCTTTCTGCTCGGGAGGTGTTGTATTATCAGCAAGAGATGGACGAATTATGTGCAATAATACTTTAGATCAAAGATTGGGTCTCGCTGCTGAAAACTTATTACCTGAAATCAGAACACTTTTATTCGGTGTTTCTTCCACCCGAAAATTCTTCCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483347.p1 GENE.R_Transcript_483347~~R_Transcript_483347.p1 ORF type:5prime_partial len:241 (+),score=19.62,vATP-synt_E|PF01991.14|1.2e-62 R_Transcript_483347:3-725(+)
KEIANMAMSEDEVQQQLHNMVNFIHKEAQEKAQEIRIKAEEEYNIEKTNIVQEQKKKINSEFEEKMKKVEVSRKIAQSNQLNQCRLAILRARETAIQQIFTEAQERLLSLTNDKNRYVKMLEKLILQGLLKLKEQEVQILCRAEDHELVVKAVPEAIRLYRDKSGIQASIEVVEKHRLAPGPQPGNKGAFCSGGVVLSARDGRIMCNNTLDQRLGLAAENLLPEIRTLLFGVSSTRKFFH*

Click here to download the sequence:
Link to NCBI Protein BLAST