Transcript Information: R_Transcript_483418.p1


Annotated TAIR IDAT4G18180.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10065626-10067317 | Forward length=414
E-Value3.2E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.062724951734429
Replicate 20.14430447021511
Replicate 30
Condition 2: 8 Hour
Replicate 10.084143865798094
Replicate 20.07684151835459
Replicate 30.37426001279148
Condition 3: 24 Hour
Replicate 10.23667842502788
Replicate 20.075791267665214
Replicate 30.45129288014221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483418.p1 GENE.R_Transcript_483418~~R_Transcript_483418.p1 ORF type:5prime_partial len:291 (+),score=37.25,Glyco_hydro_28|PF00295.13|1.5e-83 R_Transcript_483418:2-874(+)
TGGATTGAATTTTCCTGGATCGAGGGGTTAACTTTGAGAGGAGATGGGGTTTTTGATGGACAAGGGGCCAAAGCTTGGCCTTACAATCAGTGCACTACAACTTCCAACTGTCATCTCCTTCCTACTAATCTGAAGTTTGTGGGAATGAACAGAACAATCATTCACAGAATAACCTCGTTGAACAGCAAGTTTTTCCATATAGCTCTGGTAGAATGCAGAGACTTCAGGGGCAGCAACCTTCAGATTATTGCCCCAGAGGACAGTCCAAATACAGATGGAATTCACCTCGAGCGAAGCTCAGATGTTTGGTTCTCAAAGTCGAAAATTGGCACTGGGGATGATTGCATCTCTGTTGGCCAAGGGAATTCTCAAATCACCTTAACTGACATCACTTGCGGTCCTGGTCATGGTATAAGTGTTGGAAGCTTGGGGAGATACCCAAATGAGCAAGACGTGAGCGGGCTAGTCGTTAGCGATTGCACAATCACTGGGACTTCAAATGGTATTAGGATAAAGACATGGGCTAATTCTCCTGGTACAAGTGCAGCTACTAATATGACCTTTGAAAACATTGTGATGAAGCATGTTATGAATCCCATTATAATTGATCAAACATATTGCCCTTTTGATTCTTGCTCGTCCGAGGTACCATCAAGAGTAAGATTGAGTGACATATATTTCAAGAATATCAGGGGGACTTCATTATCTGCAGTAGCAGTGACACTATCTTGTAGCAAGGGGGATCCATGCAAGAATATTTTTCTACAGGATGTTCATCTGAATTTGTCATCAGGAGAGAAACTACCAACTTCTAGTTGTGAAAATGTAAATGTGAGATACATTGGTACCCAAATGCCACCTCCCTGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483418.p1 GENE.R_Transcript_483418~~R_Transcript_483418.p1 ORF type:5prime_partial len:291 (+),score=37.25,Glyco_hydro_28|PF00295.13|1.5e-83 R_Transcript_483418:2-874(+)
WIEFSWIEGLTLRGDGVFDGQGAKAWPYNQCTTTSNCHLLPTNLKFVGMNRTIIHRITSLNSKFFHIALVECRDFRGSNLQIIAPEDSPNTDGIHLERSSDVWFSKSKIGTGDDCISVGQGNSQITLTDITCGPGHGISVGSLGRYPNEQDVSGLVVSDCTITGTSNGIRIKTWANSPGTSAATNMTFENIVMKHVMNPIIIDQTYCPFDSCSSEVPSRVRLSDIYFKNIRGTSLSAVAVTLSCSKGDPCKNIFLQDVHLNLSSGEKLPTSSCENVNVRYIGTQMPPPCT*

Click here to download the sequence:
Link to NCBI Protein BLAST