Transcript Information: R_Transcript_48344.p1


Annotated TAIR IDAT4G13360.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7775133-7777701 | Forward length=421
E-Value6.4E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.999318504808
Replicate 244.569764060589
Replicate 348.707828318173
Condition 2: 8 Hour
Replicate 150.474472508581
Replicate 247.54714586447
Replicate 351.964719212877
Condition 3: 24 Hour
Replicate 183.211691179115
Replicate 272.376282785324
Replicate 375.619254098775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48344.p1 GENE.R_Transcript_48344~~R_Transcript_48344.p1 ORF type:5prime_partial len:277 (+),score=63.96,ECH_2|PF16113.1|8.3e-76,ECH_1|PF00378.16|1.1e-05 R_Transcript_48344:1-831(+)
TACAAAAAGCCATACATTAGCTTGATGGATGGAATAACTATGGGTTTTGGTATTGGCTTATCTGGCCATGGCTGTTACCGCGTTGTGACAGAGAGGACTCTTCTTGCCATGCCTGAGAATGGCATCGGTCTGTTCCCTGATGTAGGGTTCTCATACATAGCTGCAAACAGTCCAGGAGAAGGGTCAGTGGGTGCTTACCTAGGTATGACTGGAAAGAGAATCTCAAATCCAGCTGATGCACTCTATGTTGGTCTTGGGACACACTATGTGCCATCTGGAAACCTTGGTTCTTTAAAGGATGCTTTGTTGACATCCACATTATCTGAGGATCCTCACCAGGACATTGGTGCATTACTTTCAAAATATAGCAGCCAGCCAGAGTCCGAGCCACAGCTGAAGTCACTTTTACCCCATATTACTTCCACCTTTGATGCAAACAAATCAGTGAGCGAGATAATTGAAGAATTGAAAAGGCACCAGCAGAGCTCGGATGCTGTTGTGGCGGGGTGGGCCAAGGAGGCTCTGGAAGGGCTCGGCAAAGGTGCTCCATTCTCTCTCTGCTTAACACACAAGTATTTTGCTAAAGTGGCCTCTGGTTGTAGAAGCAATGACACCGAGCTCTCGAATCTAAATGGAGTGATGAAACTTGAGTATAGAATTGCTCTGAGGTCTTCACTGAGAGATGACTTTGCTGAAGGTGTCCGTGCTGTCTTGGTGGACAAGGATCAGAATCCAAAATGGAAGCCAGCCAGTGTAGAGGAAGTTGACATCAAGGACATCGAGACCCTTTTCGAACCACTGGAGCCAGGTGTGCAGGAATTGAATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48344.p1 GENE.R_Transcript_48344~~R_Transcript_48344.p1 ORF type:5prime_partial len:277 (+),score=63.96,ECH_2|PF16113.1|8.3e-76,ECH_1|PF00378.16|1.1e-05 R_Transcript_48344:1-831(+)
YKKPYISLMDGITMGFGIGLSGHGCYRVVTERTLLAMPENGIGLFPDVGFSYIAANSPGEGSVGAYLGMTGKRISNPADALYVGLGTHYVPSGNLGSLKDALLTSTLSEDPHQDIGALLSKYSSQPESEPQLKSLLPHITSTFDANKSVSEIIEELKRHQQSSDAVVAGWAKEALEGLGKGAPFSLCLTHKYFAKVASGCRSNDTELSNLNGVMKLEYRIALRSSLRDDFAEGVRAVLVDKDQNPKWKPASVEEVDIKDIETLFEPLEPGVQELNV*

Click here to download the sequence:
Link to NCBI Protein BLAST