Transcript Information: R_Transcript_48348.p1


Annotated TAIR IDAT3G24360.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8839832-8842799 | Reverse length=418
E-Value1.6E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3596983743743
Replicate 21.9958460471766
Replicate 33.3097187401285
Condition 2: 8 Hour
Replicate 11.6758386655909
Replicate 21.3603578306425
Replicate 33.3128414820478
Condition 3: 24 Hour
Replicate 14.2773100918536
Replicate 23.0189707987102
Replicate 33.9114909516508


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48348.p1 GENE.R_Transcript_48348~~R_Transcript_48348.p1 ORF type:3prime_partial len:263 (+),score=43.65,ECH_2|PF16113.1|1.3e-70,ECH_1|PF00378.16|3.2e-23 R_Transcript_48348:132-917(+)
ATGCTTAAATTTATCGACGCTTCTCGATCACTACTTGCTCGATTATCATTATCATCTCCTCCACTCTTCTCTACTCCACATTTCCTCTCAAATTCTTCCTCCACTTTCACCGTTCTACGATTTTCTCTCTCTAACAGGAGCTTTGCAGCTATGGCGGCGACGTCCGATGAGTTCGTTAAGGGAACCGTTCATCCTAATGGCGTCGCTGTCATCACTCTTGACCGTACTAAAGCTCTCAACGCCATGTTTTTAGATATGGACATCAAGTACAAAAGCTTCCTTGATCAGTGGGAAGAGGATCCAACAGTAAAATGCGTTCTAATTGACAGTAGTTCACCCCGTGCCTTTTGTGCTGGTGGTGATGTGAAGCAGATCATTACACATAACACATTGTCAGATGTCATTGAGATATTTACTTCAGAGTATTCTTTGATCTGCAAAATTTCTAACTACAAAAAGCCATACATTAGCTTGATGGATGGAATAACTATGGGTTTTGGTATTGGCTTATCTGGCCATGGCTGTTACCGCGTTGTGACAGAGAGGACTCTTCTTGCCATGCCTGAGAATGGCATCGGTCTGTTCCCTGATGTAGGGTTCTCATACATAGCTGCAAACAGTCCAGGAGAAGGGTCAGTGGGTGCTTACCTAGGTATGACTGGAAAGAGAATCTCAAATCCAGCTGATGCACTCTATGTTGGTCTTGGGACACACTATGTGCCATCTGGAAACCTTGGTTCTTTAAAGGATGCTTTGTTGACATCCACATTATCTGAGGATCCTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48348.p1 GENE.R_Transcript_48348~~R_Transcript_48348.p1 ORF type:3prime_partial len:263 (+),score=43.65,ECH_2|PF16113.1|1.3e-70,ECH_1|PF00378.16|3.2e-23 R_Transcript_48348:132-917(+)
MLKFIDASRSLLARLSLSSPPLFSTPHFLSNSSSTFTVLRFSLSNRSFAAMAATSDEFVKGTVHPNGVAVITLDRTKALNAMFLDMDIKYKSFLDQWEEDPTVKCVLIDSSSPRAFCAGGDVKQIITHNTLSDVIEIFTSEYSLICKISNYKKPYISLMDGITMGFGIGLSGHGCYRVVTERTLLAMPENGIGLFPDVGFSYIAANSPGEGSVGAYLGMTGKRISNPADALYVGLGTHYVPSGNLGSLKDALLTSTLSEDPH

Click here to download the sequence:
Link to NCBI Protein BLAST