Transcript Information: R_Transcript_483590.p1


Annotated TAIR IDAT4G18060.1
Annotated Gene NameSH3 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10027668-10029662 | Reverse length=351
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.18036801256813
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.17366345583132
Replicate 30.51703239417868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483590.p1 GENE.R_Transcript_483590~~R_Transcript_483590.p1 ORF type:internal len:127 (+),score=40.20,SH3_1|PF00018.24|8.9e-17,SH3_9|PF14604.2|4.4e-14,SH3_2|PF07653.13|7.8e-13 R_Transcript_483590:1-378(+)
CCAAGAGGGGGTAGTGCCGTACCATCGGCCCGTGGAGGCGGTGCTGCACCACCATCTATGGGAGGAGCTGGCGCAAGAGGATCTGTTCGTGGTGCTTCTGCTGCAATGGGTGGTGGAGCTCCTAGAGGTGGAGCTGCTCCGATAGGTGGCGGTGCTCCAATGGGTAGAGGTGCTGCCCCACCAATGGGACGAGGTGCTCCTCCTCCAGCAAGAGGTCCACCCCCAAGACAACCCGCCAAACCCCAAGCGAGAGCTTTATATGATTACGACGCGGCCAATGATGATGAACTTACATTCAAGGAAGGAGACCTTATCACCATCCTTCAAAAAGATTCTGGTGGCTGGTGGGAAGGAGAACTTAATGGCAAAAAAGGATGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483590.p1 GENE.R_Transcript_483590~~R_Transcript_483590.p1 ORF type:internal len:127 (+),score=40.20,SH3_1|PF00018.24|8.9e-17,SH3_9|PF14604.2|4.4e-14,SH3_2|PF07653.13|7.8e-13 R_Transcript_483590:1-378(+)
PRGGSAVPSARGGGAAPPSMGGAGARGSVRGASAAMGGGAPRGGAAPIGGGAPMGRGAAPPMGRGAPPPARGPPPRQPAKPQARALYDYDAANDDELTFKEGDLITILQKDSGGWWEGELNGKKGW

Click here to download the sequence:
Link to NCBI Protein BLAST