Transcript Information: R_Transcript_483597.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14372410200566
Replicate 20
Replicate 30.24049068342417
Condition 2: 8 Hour
Replicate 10.19280208619878
Replicate 20.058689978585789
Replicate 30.095284045251375
Condition 3: 24 Hour
Replicate 10.24102684753495
Replicate 20.23155127444176
Replicate 30.28724021898815


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483597.p1 GENE.R_Transcript_483597~~R_Transcript_483597.p1 ORF type:5prime_partial len:381 (+),score=49.01,RVT_1|PF00078.23|3.2e-43 R_Transcript_483597:1-1143(+)
ATAGCCTGCTGCACCGCTCTCTATAAATGTATATCCAAGATGCTTTGTGGTAGATTCAAGCAAGTGTTGCCTAGTATCATTTCTCAAACCCAGGGTGCTTTTTTAGAGGGGAGGAAATTTGTGCACAATATCATGGTACTGCAGGCTATCACTAGGCATTACAAGAGGAAGAACATCACCCCTAGATGTATCATGAAGATTGATCTCAGGAAAGCTTATGACTCAGTGGATTGGGACTTTCTTAGAGAGATGCTGGAAGCTATGAATTTTCCTGAAAAATTCACCCAATGGCTCATGACATGCACATGTACTGCCTCTTATACTATTTCTCTGAATGGTGGCTACCAGGGCTACTTCAAAGGAGCTAAAGGTCTCAGACAAGGTGACCCTCTTTCCCCCCTTTTATTTGTGATATGCATGGAATATCTTTCCAGAATCCTACAGTTGGTTGGGGAACTTCGGGACTTTAAGTATCATCCTTTTTGTAAACAAATGAAAATGAATCATATTTGTTTTGCTGATGACTTAATCTTGTTCTGTGCTGGTGAGAGCAAATCTGTGAGCCTTATGTTAAGGGGATTTAAGAGTTTTTCAACCGCATCTAGATTGGAGATGAACTGCCAAAAATCAGCCATATATTTTGGTAATGTGGGGAGGGTGACTGCACTCACCATTGCTCAGTGGACAGGACTTGCTGTTTCTTCACTTCCTTTTTCATATCTGGGTGTGCCTATCACTTCTAAAAAGCTTACCAGAGCTGAATGTGACTGCTTGGTGGACAAAATAACAGCTCGGGTCAGACAATGGAGGTCTAAACAGCTGTCTTATACTGGCAGAACTATTCTGATCAATTCTGTGTTGTTGAGCCTACATTCCTACTGGGCTGGTGTGTTTTTGATACCCAAAACTATGATCAATAAAATAATGGCAGCGTGTAGGAATTTCTTGTGGTGTGGCTCTGAGATCTACCATGGTCCCCCTCCTGTGGCCTGGGACTTTGCTTGTCAAAAGAAGAAATATGGGGGTCTTGGCATTAAGGACTTGGCTCAGAAAGAGGATTCCCTATGGGTAAAATGGGTCCATAACATATATATTCAACAGGGTTCTTGGTGGGATCACAATCCTCCTGTAGATGCAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483597.p1 GENE.R_Transcript_483597~~R_Transcript_483597.p1 ORF type:5prime_partial len:381 (+),score=49.01,RVT_1|PF00078.23|3.2e-43 R_Transcript_483597:1-1143(+)
IACCTALYKCISKMLCGRFKQVLPSIISQTQGAFLEGRKFVHNIMVLQAITRHYKRKNITPRCIMKIDLRKAYDSVDWDFLREMLEAMNFPEKFTQWLMTCTCTASYTISLNGGYQGYFKGAKGLRQGDPLSPLLFVICMEYLSRILQLVGELRDFKYHPFCKQMKMNHICFADDLILFCAGESKSVSLMLRGFKSFSTASRLEMNCQKSAIYFGNVGRVTALTIAQWTGLAVSSLPFSYLGVPITSKKLTRAECDCLVDKITARVRQWRSKQLSYTGRTILINSVLLSLHSYWAGVFLIPKTMINKIMAACRNFLWCGSEIYHGPPPVAWDFACQKKKYGGLGIKDLAQKEDSLWVKWVHNIYIQQGSWWDHNPPVDAS*

Click here to download the sequence:
Link to NCBI Protein BLAST