Transcript Information: R_Transcript_48368.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value3.8E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.645468247626
Replicate 210.333602399244
Replicate 38.9759943558591
Condition 2: 8 Hour
Replicate 110.439114836443
Replicate 213.108103148281
Replicate 313.144269759591
Condition 3: 24 Hour
Replicate 114.8973858813
Replicate 212.099279955646
Replicate 313.311017897361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48368.p1 GENE.R_Transcript_48368~~R_Transcript_48368.p1 ORF type:complete len:319 (+),score=38.85,Sina|PF03145.12|1e+04,Sina|PF03145.12|1.7e-74 R_Transcript_48368:211-1167(+)
ATGGCTACTGGAAGTCCATATATTGATGATATGAGAAGCAAGTCTGAAGTTATTGATCCTCCCTCGTGTGAAGACATGATGGATATATGTGAACATGTGAACGATTCAGCGCAAAGTGTTGTCAAACCTAATATGACCGTTTCTAGTAGCGTCCATGAACTGCTGGAGTGCCCAGTATGCTTAACAGCCATGTATCCTCCTATCCACCAGTGCTCAAACGGGCACACTATTTGTTCTACTTGCAAGCCCAGGGTACACAACCGATGTCCAACTTGCAGGCATGAACTAGGAAATATCAGATGCCTCGCCTTAGAAAAGGTGGCTGCATCCCTTGAGCTCCCATGTAAATATCAAAGTTTTGGATGTGTGGGCATATACCCTTACTACAGCAAACTGAAGCATGAATCCCAGTGTACATTTAGACCCTACAACTGTCCTTATGCTGGATCAGAATGTGCCTGCATTGGTGACATCCCATATTTGGTGGCGCACCTTAAGGATGATCATAAAGTCGATATGCACATTGGAAGTACATTCAACCATCGATATGTCAAGTCAAATCCTCATGAGGTTGAAAATGCCACTTGGATGCTTACGGTCTTTAGCTGCTATGGGCAGTACTTCTGCCTTCATTTTGAAGCATTCCAGCTTGGGATGGCTCCTGTTTATATGGCATTTCTACGTTTCATGGGTGATGAGACAGAGGCTCGAAAGTTCAGCTACAGCTTAGAAGTGGGTGGATATGGGAGAAAACTAACATGGGAGGGAACCCCAAGAAGTATTCGTGATAGCCACAGGAAGGTTAGAGACAGTCACGATGGTCTCATAATCCAGCGTAAATTAGCACTTTTCTTCTCAGGAGGAGATAGGAAAGAACTAAAGCTTCGGGTTACTGGAAGAATATGGAAGGAACAAAATCTAGAATCTGGGGCATGCATATCTACACTTTGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48368.p1 GENE.R_Transcript_48368~~R_Transcript_48368.p1 ORF type:complete len:319 (+),score=38.85,Sina|PF03145.12|1e+04,Sina|PF03145.12|1.7e-74 R_Transcript_48368:211-1167(+)
MATGSPYIDDMRSKSEVIDPPSCEDMMDICEHVNDSAQSVVKPNMTVSSSVHELLECPVCLTAMYPPIHQCSNGHTICSTCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCVGIYPYYSKLKHESQCTFRPYNCPYAGSECACIGDIPYLVAHLKDDHKVDMHIGSTFNHRYVKSNPHEVENATWMLTVFSCYGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARKFSYSLEVGGYGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRKLALFFSGGDRKELKLRVTGRIWKEQNLESGACISTLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST