Transcript Information: R_Transcript_48372.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.793052904952
Replicate 237.093464068793
Replicate 340.97760836645
Condition 2: 8 Hour
Replicate 134.280210926143
Replicate 250.684665506687
Replicate 350.622825174635
Condition 3: 24 Hour
Replicate 145.150354214485
Replicate 242.150050324214
Replicate 347.180163436201


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48372.p1 GENE.R_Transcript_48372~~R_Transcript_48372.p1 ORF type:5prime_partial len:90 (+),score=17.85,Sina|PF03145.12|8.9e-25 R_Transcript_48372:2-271(+)
CTTGGTATGGCTCCTGTCTACATGGCTTTCTTACGGTTTATGGGAGATGATAACGAGGCAAAGAATTATAGCTACACCCTTGAGGTAGGAGGAAATGGAAGAAAGATGATGTGGCAAGGCGTTCCAAGAAGCATTAGGGACAGCCACCGCAAGGTGCGTGACAGTTTTGATGGGCTCATCATTCAGCGAAATATGGCTCTTTTCTTTTCGGGTGGTGACCGGAAGGAACTGAAACTGAGGGTGACAGGAAGAATATTTAAAGAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48372.p1 GENE.R_Transcript_48372~~R_Transcript_48372.p1 ORF type:5prime_partial len:90 (+),score=17.85,Sina|PF03145.12|8.9e-25 R_Transcript_48372:2-271(+)
LGMAPVYMAFLRFMGDDNEAKNYSYTLEVGGNGRKMMWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIFKEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST