Transcript Information: R_Transcript_483836.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4.8E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2920473752755
Replicate 20.083985201665192
Replicate 30.18325390076922
Condition 2: 8 Hour
Replicate 10.19588691957796
Replicate 20.17888705472948
Replicate 30.1452128849631
Condition 3: 24 Hour
Replicate 10.27549368673245
Replicate 20.088221035562309
Replicate 30.17510163749518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_483836.p1 GENE.R_Transcript_483836~~R_Transcript_483836.p1 ORF type:complete len:250 (+),score=25.86,zf-RVT|PF13966.2|3.3e+03,zf-RVT|PF13966.2|5e-20,zf-RVT|PF13966.2|5.8e+03 R_Transcript_483836:230-979(+)
ATGAACTCAATGTGGACTAACTGGCTTAAGAGATATTATTTACAGCACCATACTATATGGGACTGTAGAATTAAATGTAATGACTCCCATATTTGGAAGAGTCTACTGATTCTAAAGGAGGATATAGTTCGAATAGTAGGGAATAAGGAGGCTGCTAGAAATCTTGTTGATAGTCGGGGTAGTGAAGGCAAGTACAACATTCATAAGGCATATGATTTCTTCAGAAGTAAAGCAAGCCCCTGGAGATGTCACATAATCATATGGGAGAAAATGGCTATTCCTAAGCATAGAGTTACTTTCTGGATGGCAATGCAGAATAAACTTGCTACTGTGGACAACCTTCTAAACAAAGGGTTAATCATTGTAAACAGATGTTATTTGTGTAAGGCTGCATCAGAAGATATTCAGCATCTGTATTTTGAGTGCCTCTACTCTCAACAGGTGTGGAAAGGTGTTCTTGAGTGGCTGGGACTTCAGGCCAGAAGATGGAGTTTGAAACGAGAAGTCAAGTGGTTCGTGAAGCACTACAGGGGCCAGCATGTTAGGAAGAAATGGGCACGTGCCTGTATTGCAGCAGCAGTGTATGTGATCTGGAGGGAAAGGAACCAAAGGTGCTTTCAAGATAAAGACAAACCAGCTAGCGATGTAGTTAGACATCTGAAGTATCTTGTTAGTAGTAGAATTTTGTATAGAGATAGTAGTAGAGATACTGTACAGATGCTGGTAGGCCATCCCTTACCATGTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_483836.p1 GENE.R_Transcript_483836~~R_Transcript_483836.p1 ORF type:complete len:250 (+),score=25.86,zf-RVT|PF13966.2|3.3e+03,zf-RVT|PF13966.2|5e-20,zf-RVT|PF13966.2|5.8e+03 R_Transcript_483836:230-979(+)
MNSMWTNWLKRYYLQHHTIWDCRIKCNDSHIWKSLLILKEDIVRIVGNKEAARNLVDSRGSEGKYNIHKAYDFFRSKASPWRCHIIIWEKMAIPKHRVTFWMAMQNKLATVDNLLNKGLIIVNRCYLCKAASEDIQHLYFECLYSQQVWKGVLEWLGLQARRWSLKREVKWFVKHYRGQHVRKKWARACIAAAVYVIWRERNQRCFQDKDKPASDVVRHLKYLVSSRILYRDSSRDTVQMLVGHPLPCM*

Click here to download the sequence:
Link to NCBI Protein BLAST