Transcript Information: R_Transcript_484000.p1


Annotated TAIR IDATCG00340.1
Annotated Gene NamePhotosystem I, PsaA/PsaB protein
Annotated Gene Symbol(s)PSAB
Annotation TypeOrtholog
Chromosome PositionchrC:37375-39579 | Reverse length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4248626098406
Replicate 23.9843725736685
Replicate 34.1515409289402
Condition 2: 8 Hour
Replicate 114.775052835971
Replicate 22.8129894000639
Replicate 32.9027095874819
Condition 3: 24 Hour
Replicate 12.8391318106756
Replicate 22.5394114714098
Replicate 33.5001659947064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_484000.p1 GENE.R_Transcript_484000~~R_Transcript_484000.p1 ORF type:5prime_partial len:469 (+),score=7.40,PsaA_PsaB|PF00223.15|4.9e-240 R_Transcript_484000:1-1407(+)
AGTTTATGGCTAACTGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTGTTGCGGGTCACATGTATAGAACGAACTTTGGGATTGGGCATAGTATGAAAGATCTTTTAGAAGCGCATATTCCTCCAGGAGGACGATTGGGGCGTGGGCATAAGGGTCTTTATGACACAATCAACAATTCTATTCATTTTCAATTAGGACTTGCTCTAGCCTCTTTAGGGGTTATAACTTCTTTGGTGGCCCAACACATGTATTCTTTACCCGCTTATGCGTTCATTGCACAAGACTTTACTACTCAAGCTGCATTATATACGCATCACCAATACATCGCGGGATTCATCATGACAGGAGCTTTTGCTCATGGAGCTATATTTTTCATTAGAGATTACAATCCGGAGCAGAATGAGGATAATGTATTGGCAAGAATGTTAGAACATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGTCTCTTTTTAGGGTTTCATACTTTGGGTCTTTATGTTCATAATGATGTCATGCTTGCTTTTGGTACTCCAGAAAAACAAATTTTGATCGAACCCATATTTGCTCAATGGATACAATCTGCTCATGGGAAAACCTCATATGGGTTCGATGTACTTTTATCCTCAACAAGTGGCCCGGCATTTAATGCAGGTCGAAGTATATGGTTGCCCGGCTGGTTAAATGCTATTAATGAGAATAGTAATTCCCTATTCTTAACAATAGGGCCTGGAGACTTTTTGGTTCATCATGCTATTGCCCTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTTTAGATGCCCGCGGTTCCAAGTTAATGCCAGATAAAAAGGATTTCGGTTATAGTTTTCCTTGCGATGGTCCGGGACGAGGCGGTACTTGTGATATTTCGGCTTGGGATGCTTTTTATTTGGCAGTTTTTTGGATGTTAAATACTATTGGATGGGTTACTTTTTATTGGCATTGGAAGCACATCACATTGTGGCAGGGTAATGTTTCGCAATTTAATGAATCTTCCACTTATTTGATGGGATGGTTAAGAGATTATTTATGGTTAAACTCTTCACAGCTTATCAATGGATATAACCCTTTTGGTATGAATAGTTTATCGGTTTGGGCGTGGATGTTTTTATTTGGACATCTTGTTTGGGCGACCGGATTTATGTTCTTAATTTCGTGGCGTGGATATTGGCAGGAGTTGATTGAAACTTTAGCATGGGCTCATGAACGCACACCTTTGGCCAATTTGATTCGATGGAGAGATAAACCGGTGGCTCTTTCCATTGTGCAAGCAAGATTAGTTGGATTAGCCCACTTCTCTGTAGGTTATATATTCACATATGCGGCTTTCCTGATTGCCTCTACGTCGGGCAAATTTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_484000.p1 GENE.R_Transcript_484000~~R_Transcript_484000.p1 ORF type:5prime_partial len:469 (+),score=7.40,PsaA_PsaB|PF00223.15|4.9e-240 R_Transcript_484000:1-1407(+)
SLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG*

Click here to download the sequence:
Link to NCBI Protein BLAST