Transcript Information: R_Transcript_48457.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value6E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6676510329575
Replicate 21.4717033002078
Replicate 31.8196941081056
Condition 2: 8 Hour
Replicate 11.8307188745604
Replicate 22.4032723474171
Replicate 31.8660534282641
Condition 3: 24 Hour
Replicate 12.2528689335597
Replicate 21.8551152337869
Replicate 31.9433008834161


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48457.p1 GENE.R_Transcript_48457~~R_Transcript_48457.p1 ORF type:complete len:214 (+),score=34.05 R_Transcript_48457:54-695(+)
ATGTTCTCAGCTTTAAAATTACCTCCTTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAATTCTAACCCTAACTTCATCTCCGGTAGCACAACTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTGAATTCACGTCTTCAGTTGGATCCCCTTCGCTTAATCTCTCTCCTTCTCAATGGACTCTTTCTCAACGCCATTTCACCGTCATAAATATCGCTGCTTGTGCCTTTGCAATTTCAGCAACTTGGCTCTTCTGTGCTGCAATTCCAACACTTTTGGCTTTTAAAAGAGCAGCAGAGTCGATGGAGAAGCTAATGGATGTTGCAAGAGAAGAGCTTCCAGACACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACAACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAGGCTCTACTCGTGCAGTTCGTGTCGCAGAAGAAAAATTGCGTCATTTTGCCAACATGACTTCAAGAGGTAGTTTCCTAGCCTGGATAAACTCAAGTAAATGCCTTAATTGTTATATGGAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48457.p1 GENE.R_Transcript_48457~~R_Transcript_48457.p1 ORF type:complete len:214 (+),score=34.05 R_Transcript_48457:54-695(+)
MFSALKLPPSIPPSPTFHRKINSNVTGILTLTSSPVAQLRLPPRRFTVLSTQSSPKVTNSTEPSLLSSEFTSSVGSPSLNLSPSQWTLSQRHFTVINIAACAFAISATWLFCAAIPTLLAFKRAAESMEKLMDVAREELPDTMAAVRLSGMEISDLTTELSDLGQEITQGVRGSTRAVRVAEEKLRHFANMTSRGSFLAWINSSKCLNCYMEL*

Click here to download the sequence:
Link to NCBI Protein BLAST