Transcript Information: R_Transcript_48458.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value5.8E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3998490356968
Replicate 25.6746757881887
Replicate 36.279453163424
Condition 2: 8 Hour
Replicate 16.7123413561946
Replicate 26.6478297365687
Replicate 35.0460075855902
Condition 3: 24 Hour
Replicate 17.0025744053615
Replicate 27.4085232566804
Replicate 310.310038501164


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48458.p1 GENE.R_Transcript_48458~~R_Transcript_48458.p1 ORF type:complete len:259 (+),score=41.24 R_Transcript_48458:54-830(+)
ATGTTCTCAGCTTTAAAATTACCTCCTTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAACCCTAACCCTAACTTCAACTCCGGTAGCACAATTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTAAATTCACGTCTTCAGTTGGATCTCCTTCGCTAAATCTCTCTCCTTCTCAATGGACTCTTTCTCAGCGCCATTTCACTGTCTTAAATATCGCTGCTTGTGCCGTTGCAATTTCAGCAACTTGGCTTTTCTGTGCTGCAATTCCAACACTTTTGGCTTTTAAAAGAGCAGCAGAGTCGATGGAGAAGCTAATGGATGTTGCAAGAGAAGAGCTTCCAGACACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACAACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAGGCTCTACTCGTGCAGTTCGTGTCGCAGAAGAAAAATTGCGTCATTTTGCCAACATGACTTCAAGAGCACCAATGCTGGTGGTAGCCAACACGAAAACAACCACCGCTGAGCCTGCATTAGCTAGATCTGCCAGAGGCATGCGAGAGGGAATTGTAAAAGGTCGTGCAATGTTGCAAATGTTTTTTGCTCTTACCAGGTTTTCTATGTCCATTTTCAGCTATTTATCAAATAGGTCTAAACGCCGGGCATTGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48458.p1 GENE.R_Transcript_48458~~R_Transcript_48458.p1 ORF type:complete len:259 (+),score=41.24 R_Transcript_48458:54-830(+)
MFSALKLPPSIPPSPTFHRKINSNVTGTLTLTSTPVAQFRLPPRRFTVLSTQSSPKVTNSTEPSLLSSKFTSSVGSPSLNLSPSQWTLSQRHFTVLNIAACAVAISATWLFCAAIPTLLAFKRAAESMEKLMDVAREELPDTMAAVRLSGMEISDLTTELSDLGQEITQGVRGSTRAVRVAEEKLRHFANMTSRAPMLVVANTKTTTAEPALARSARGMREGIVKGRAMLQMFFALTRFSMSIFSYLSNRSKRRALNK*

Click here to download the sequence:
Link to NCBI Protein BLAST