Transcript Information: R_Transcript_48460.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44519416962729
Replicate 20.40968391056191
Replicate 30.55870091697933
Condition 2: 8 Hour
Replicate 10.59721621822549
Replicate 20.54538736198014
Replicate 31.32816663076
Condition 3: 24 Hour
Replicate 10.67193582129866
Replicate 20.96827965861071
Replicate 31.7083086584895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48460.p1 GENE.R_Transcript_48460~~R_Transcript_48460.p1 ORF type:complete len:205 (+),score=35.21 R_Transcript_48460:54-668(+)
ATGTTCTCAGCTTTAAAATTACCTCCTTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAACCCTAACCCTAACTTCAACTCCGGTAGCACAATTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTAAATTCACGTCTTCAGTTGGATCTCCTTCGCTAAATCTCTCTCCTTCTCAATGGACTCTTTCTCAACGCCATTTCACCGTCATAAATATCGCTGCTTGTGCCTTTGCAATTTCAGCAACTTGGCTCTTCTGTGCTGCAATTCCAACACTTTTGGCTTTTAAAAGAGCAGCAGAGTCGATGGAGAAGCTAATGGATGTTGCAAGAGAAGAGCTTCCAGACACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACAACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAGGCTCTACTCGTGCAGTTCGTGTCGCAGAAGAAAAATTGCGTCATTTTGCCAACATGACTTCAAGAGGTGGTAGCCAACACCAAAACAACCACCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48460.p1 GENE.R_Transcript_48460~~R_Transcript_48460.p1 ORF type:complete len:205 (+),score=35.21 R_Transcript_48460:54-668(+)
MFSALKLPPSIPPSPTFHRKINSNVTGTLTLTSTPVAQFRLPPRRFTVLSTQSSPKVTNSTEPSLLSSKFTSSVGSPSLNLSPSQWTLSQRHFTVINIAACAFAISATWLFCAAIPTLLAFKRAAESMEKLMDVAREELPDTMAAVRLSGMEISDLTTELSDLGQEITQGVRGSTRAVRVAEEKLRHFANMTSRGGSQHQNNHL*

Click here to download the sequence:
Link to NCBI Protein BLAST