Transcript Information: R_Transcript_48464.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value8E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9038801518871
Replicate 23.3403205207747
Replicate 35.7266843990381
Condition 2: 8 Hour
Replicate 11.8549897687307
Replicate 23.8962142602066
Replicate 34.8129270584359
Condition 3: 24 Hour
Replicate 12.782764512449
Replicate 22.8404500086349
Replicate 33.3163188919541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48464.p1 GENE.R_Transcript_48464~~R_Transcript_48464.p1 ORF type:complete len:132 (+),score=23.98 R_Transcript_48464:374-769(+)
ATGGAGAAGCTAATGGACGTTGCAAGAAAAGAGCTTCCGGGCACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACAACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAAGCTCTACTCGTGCAGTTCGTGTCACAGAAGAAAAATTGCATCATTTTGCCAACATGACTTCACGAGCACCAATGCAGATGGTAACCAACACCAAAACAACCACCGCCGAGCCTGCATTAGCTAGATCTGCCAGAGGCATGCGAGAGGGAATTGTAAAAGGTCGTGCAATGTTGCAAATGTTTTTTGCTCTTACCAGGTTTTCTATGTCCATTTTCAGCTATTTATCAAATAGGTCTAAACGCCGGGCATTGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48464.p1 GENE.R_Transcript_48464~~R_Transcript_48464.p1 ORF type:complete len:132 (+),score=23.98 R_Transcript_48464:374-769(+)
MEKLMDVARKELPGTMAAVRLSGMEISDLTTELSDLGQEITQGVRSSTRAVRVTEEKLHHFANMTSRAPMQMVTNTKTTTAEPALARSARGMREGIVKGRAMLQMFFALTRFSMSIFSYLSNRSKRRALNK*

Click here to download the sequence:
Link to NCBI Protein BLAST