Transcript Information: R_Transcript_48484.p1


Annotated TAIR IDAT1G53645.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20026434-20028587 | Reverse length=523
E-Value3.8E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.306720472099
Replicate 223.547643693976
Replicate 325.462070873811
Condition 2: 8 Hour
Replicate 124.583418194047
Replicate 223.786276699588
Replicate 329.577724078639
Condition 3: 24 Hour
Replicate 133.522057167146
Replicate 231.105823295874
Replicate 332.962360046403


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48484.p1 GENE.R_Transcript_48484~~R_Transcript_48484.p1 ORF type:complete len:502 (+),score=156.36 R_Transcript_48484:252-1757(+)
ATGAGAGGAAGTTTTGGATTGCTTAAGAATGTTAATGGTATGGGAGCTAGTACTGGGATTGGGAGCACAACTAGGGTTGTTTGTTGTTCCCCTTTTTCGACATCGTCGGGTGGCGGTCGAGGCCGAGGTGGAGGTGGTGGGTCCGGACCACCTAGGTTTGATTTTGTAGCAAGTCATCCTGGAAAGGTTGATGATTCCAATGAACAACAATCAGATGATGTGGATAATTCAGCCCCATTATCTGGGGTTGGCCGAGGTAGGGGCATCCCCTTGCCTTGGACGGCATCCTTTATGCGCCCTTCATTTACGGGATTCATTGCTAAGGACCCGTCTCAGCAACCTGGGGTAGGTAGGGGTGGAGGCCGTCCCATTCAACAACCAGTGGCAGGAAGTGAGGAAGGTTTGGGACCTAAGAAGCCCATATTTTTAGTGAAAGATGAAGGGACAGGCTGTGTTAATGTTGCTGATTCGGTTAGTGGGGTACCTCGTAGACCCATTGGAGAGAAGAGTCTTCCTGAGAGTGTTTTGAATGTGTTGACGGGGTCTGGGAGGGGAAAACCGGAGAGAAGACCAGTGCAGGCTGAGATTGAAGTGAAAGAAGAGAATAGGCATCTTAGACCACATCAAGTCAATGCGAGTGGTGGGGATGGGGCTGAAAGAGGGAGGGAGAGAGTTGAATTAGTTGAGAGTAGTTCTGCAAAGAAGGGTCCTAAGTTGAGCCGAGATGAGGCAGTGAAGAAGGCAGTTGGGATCTTGTCGAGGCATGAGGATGGGGAGCAACAAGGAGAGGTCGTGGGTGGAGGAAGAGGGGCTGGACGTGGAGCTGAACGTGGACGTGGCCGTGGACGTGGGAGAGGATTTTCTGGAAGGGGGAGGGGTAGAAGACGAAGAGATGATTTTGTTGAGGAGGAGGACGATGATGAGACGGGACTTTATCTAGGTGATGACGCTGATGGTGAGAAATTGGCTGAGAAACTTGGCCCTGCATTGTCTAATGAATTGACAGAAGCTTTTGAAGAAATGTCTTATAGTGTCTTACCTGATCCTGAGGAGGATGAATACATTGAGGCTCTTGACACCAATCTCAAGATTGAGTTGGAGCCTGAATATTTGTGGGGGAACCTTGAAGCAAATCCAGATATTGATGAGAAGCCACCTATGCCTCTTCCTGAAGCTCTTGAGACGATGAAGCCATTCTTGATGGCTTATGAGGGAATAGAGAATCAAGAGGAATGGGAGGAAGTTGTGAAGGAAGCAATGGAAAAGGTTCCACTTTTGAAAGAGATTGTGGATCATTATTGTGGACCTGACAGGGTAACTGCCAAGCAGCAATATGAAGAACTGGAAAGAGTTGCCAAAACTCTTCCTGCTAGTGCCCCTGACTCGGTTAAGCGCTTCACCAACCGTGCTGTCCTTTCGCTTCAGAGCAATCCAGGCTGGGGATTTGACCGAAAATGCCAGTTCATGGACAAGCTTGTAGACGAGGTTTCCAAGTCCTACAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48484.p1 GENE.R_Transcript_48484~~R_Transcript_48484.p1 ORF type:complete len:502 (+),score=156.36 R_Transcript_48484:252-1757(+)
MRGSFGLLKNVNGMGASTGIGSTTRVVCCSPFSTSSGGGRGRGGGGGSGPPRFDFVASHPGKVDDSNEQQSDDVDNSAPLSGVGRGRGIPLPWTASFMRPSFTGFIAKDPSQQPGVGRGGGRPIQQPVAGSEEGLGPKKPIFLVKDEGTGCVNVADSVSGVPRRPIGEKSLPESVLNVLTGSGRGKPERRPVQAEIEVKEENRHLRPHQVNASGGDGAERGRERVELVESSSAKKGPKLSRDEAVKKAVGILSRHEDGEQQGEVVGGGRGAGRGAERGRGRGRGRGFSGRGRGRRRRDDFVEEEDDDETGLYLGDDADGEKLAEKLGPALSNELTEAFEEMSYSVLPDPEEDEYIEALDTNLKIELEPEYLWGNLEANPDIDEKPPMPLPEALETMKPFLMAYEGIENQEEWEEVVKEAMEKVPLLKEIVDHYCGPDRVTAKQQYEELERVAKTLPASAPDSVKRFTNRAVLSLQSNPGWGFDRKCQFMDKLVDEVSKSYK*

Click here to download the sequence:
Link to NCBI Protein BLAST