Transcript Information: R_Transcript_48493.p1


Annotated TAIR IDAT3G26900.1
Annotated Gene Nameshikimate kinase like 1
Annotated Gene Symbol(s)SKL1, ATSKL1
Annotation TypeOrtholog
Chromosome Positionchr3:9912314-9914424 | Reverse length=280
E-Value2.8E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.893520288206
Replicate 212.172701775093
Replicate 313.210020454223
Condition 2: 8 Hour
Replicate 112.393152503974
Replicate 212.209315851936
Replicate 313.363148922984
Condition 3: 24 Hour
Replicate 113.662007982131
Replicate 213.530833675201
Replicate 39.7353287717795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48493.p1 GENE.R_Transcript_48493~~R_Transcript_48493.p1 ORF type:complete len:326 (+),score=80.80,SKI|PF01202.18|4.8e-25 R_Transcript_48493:35-979(+)
ATGGAGAAGATAAGCCCATCAGCAATCAACTCCAACTCCATTTCCATTTCTAAACTTAACCCACTTCTTCTAATTCAACAACCATGTCGTTTGCTTTCCCAAATCTCTTGTGTTTCTTCAAAAAAACCCAGCTCCCCTTTTCATAATCTTTTATCTTATTCTTATTTCCCTCAAAATGTCCCAATAAGAGTTGGCCAAAATTGGGGGCAACAACTCACCACCACTTGGGCACTTTCTGATGAAACTACTGCTGCTGTGGATTCAGCAACAAAACCAGTTAATGGTGATCCATCCCTTGCAGTGAAGAAGAAAGCAACAGATGTGCGTGCTGACTTGAAAGGGACATCAATATTCCTTGTGGGTATGAACAGTGCAATGAAGACTGGTGTTGGGAAGCTTATTGCTGACGTCTTGCGCTATTACTACTTTGATAGTGATAATGTAGTTGAAGAGGCAGCTGGTGAGGATTCTTCTGGCAGATCTTTCAAAGATAGAGATGAAAGTGGATTTCGTGAATCGGAGACTGAGGTATTGAAGCAATTATCATCCATGGGACGACTGGTGGTCAATGCTGGAAATGGTGCAGTTCAGAGTGCAACTAATCTTGCCCTTTTAAGACATGGAATTTCAGTATGGATAGATGTTCCTTTGGACATGATAGCTAAGGGAGTCATAACAGATAATGGACAATTGACGGTGTCCAACATAGCTTCCCCATATTCCTTCTCCGAGGCATTGAGCCATTTAACTGGGCTTTATGAAGAGAACAGAGCTGGATTTGCTACTGCAGATGTAACTATATCAGTTCAAAATGTGGCTTCAACGTTTGGCTACGATGAATTTGAACAAGTAACTGCCGAAGACATGGCATTGGAGGTTCTAAAGGAGATAGAAAAGCTTACGAGAGTGAAGAAGATGATGCAAGAAGCTGGAAAGCCATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48493.p1 GENE.R_Transcript_48493~~R_Transcript_48493.p1 ORF type:complete len:326 (+),score=80.80,SKI|PF01202.18|4.8e-25 R_Transcript_48493:35-979(+)
MEKISPSAINSNSISISKLNPLLLIQQPCRLLSQISCVSSKKPSSPFHNLLSYSYFPQNVPIRVGQNWGQQLTTTWALSDETTAAVDSATKPVNGDPSLAVKKKATDVRADLKGTSIFLVGMNSAMKTGVGKLIADVLRYYYFDSDNVVEEAAGEDSSGRSFKDRDESGFRESETEVLKQLSSMGRLVVNAGNGAVQSATNLALLRHGISVWIDVPLDMIAKGVITDNGQLTVSNIASPYSFSEALSHLTGLYEENRAGFATADVTISVQNVASTFGYDEFEQVTAEDMALEVLKEIEKLTRVKKMMQEAGKPF*

Click here to download the sequence:
Link to NCBI Protein BLAST