Transcript Information: R_Transcript_48497.p1


Annotated TAIR IDAT3G26900.1
Annotated Gene Nameshikimate kinase like 1
Annotated Gene Symbol(s)SKL1, ATSKL1
Annotation TypeHomolog
Chromosome Positionchr3:9912314-9914424 | Reverse length=280
E-Value1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16105553783575
Replicate 20.30876912376909
Replicate 30.67372757635742
Condition 2: 8 Hour
Replicate 10.43210349906903
Replicate 20.92074219346058
Replicate 30.74741926083946
Condition 3: 24 Hour
Replicate 10.20256888730327
Replicate 20
Replicate 31.0300096323246


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48497.p1 GENE.R_Transcript_48497~~R_Transcript_48497.p1 ORF type:complete len:340 (+),score=72.89,SKI|PF01202.18|6.2e-25 R_Transcript_48497:35-1021(+)
ATGGAGAAGATAAGCCCATCAGCAATCAACTCCAACTCCATTTCCATTTCTAAACTTAACCCACTTCTTCTAATTCAACAACCATGTCGTTTGCTTTCCCAAATCTCTTGTGTTTCTTCAAAAAAACCCAGCTCCCCTTTTCATAATCTTTTATCTTATTCTTATTTCCCTCAAAATGTCCCAATAAGAGTTGGCCAAAATTGGGGGCAACAACTCACCACCACTTGGGCACTTTCTGATGAAACTACTGCTGCTGTGGATTCAGCAACAAAACCAGTTAATGGTGATCCATCCCTTGCAGTGAAGAAGAAAGCAACAGATGTGCGTGCTGACTTGAAAGGGACATCAATATTCCTTGTGGGTATGAACAGTGCAATGAAGACTGGTGTTGGGAAGCTTATTGCTGACGTCTTGCGCTATTACTACTTTGATAGTGATAATGTAGTTGAAGAGGCAGCTGGTGAGGATTCTTCTGGCAGATCTTTCAAAGATAGAGATGAAAGTGGATTTCGTGAATCGGAGACTGAGGTATTGAAGCAATTATCATCCATGGGACGACTGGTGGTCAATGCTGGAAATGGTGCAGTTCAGAGTGCAACTAATCTTGCCCTTTTAAGACATGGAATTTCAGTATGGATAGATGTTCCTTTGGACATGATAGCTAAGGGAGTCATAACAGATAATGGACAATTGACGGTGTCCAACATAGCTTCCCCATATTCCTTCTCCGAGGCATTGAGCCATTTAACTGGGCTTTATGAAGAGAACAGAGCTGGATTTGCTACTGCAGATGTAACTATATCAGTTCAAAATGTGGCTTCAACGTTTGGCTACGATGAATTTGAACAAGTAACTGCCGAAGACATGGCATTGGAGGTAGAAAAACGTTCTTTAATTAGTGCTAATTGCTCCTCCCCTTTGCAAGATAGTCGGTTTCCCTTCCAGATTTTGTTCTCGGGTAGTTTTGTTTCTACGGTCCTATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48497.p1 GENE.R_Transcript_48497~~R_Transcript_48497.p1 ORF type:complete len:340 (+),score=72.89,SKI|PF01202.18|6.2e-25 R_Transcript_48497:35-1021(+)
MEKISPSAINSNSISISKLNPLLLIQQPCRLLSQISCVSSKKPSSPFHNLLSYSYFPQNVPIRVGQNWGQQLTTTWALSDETTAAVDSATKPVNGDPSLAVKKKATDVRADLKGTSIFLVGMNSAMKTGVGKLIADVLRYYYFDSDNVVEEAAGEDSSGRSFKDRDESGFRESETEVLKQLSSMGRLVVNAGNGAVQSATNLALLRHGISVWIDVPLDMIAKGVITDNGQLTVSNIASPYSFSEALSHLTGLYEENRAGFATADVTISVQNVASTFGYDEFEQVTAEDMALEVEKRSLISANCSSPLQDSRFPFQILFSGSFVSTVLF*

Click here to download the sequence:
Link to NCBI Protein BLAST