Transcript Information: R_Transcript_485009.p1


Annotated TAIR IDAT3G22110.1
Annotated Gene Name20S proteasome alpha subunit C1
Annotated Gene Symbol(s)PAC1
Annotation TypeHomolog
Chromosome Positionchr3:7792819-7793571 | Reverse length=250
E-Value9E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37250940723916
Replicate 20
Replicate 30.4674844407378
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22505366214875
Replicate 30.2233439253765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485009.p1 GENE.R_Transcript_485009~~R_Transcript_485009.p1 ORF type:5prime_partial len:98 (+),score=8.96,Proteasome|PF00227.22|3.9e-09 R_Transcript_485009:1-294(+)
AATTATGCAGGATGGAAAGGAACTGCGATCGGTAATAACAGTCCTTCCGCACAAAATATTTTAAAACAAGAATATGATCCCGAAATAACGGTAGATGGCGCTTTAAAACTGGCCGTTAAAGTGATGTGTAAAATTGCAGATGCATCCGGACTTGATAATGAAAAGATTGAGTGCTCAACTTTAGTTTTGGGTGAAGACGGAAAACCACATTTCAGATGCTTGACTCCTGATGAGATCACTGCTCTCCTCAAATCTGTTGATATGTTCAGCGATTCACAACCCCAAGCAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485009.p1 GENE.R_Transcript_485009~~R_Transcript_485009.p1 ORF type:5prime_partial len:98 (+),score=8.96,Proteasome|PF00227.22|3.9e-09 R_Transcript_485009:1-294(+)
NYAGWKGTAIGNNSPSAQNILKQEYDPEITVDGALKLAVKVMCKIADASGLDNEKIECSTLVLGEDGKPHFRCLTPDEITALLKSVDMFSDSQPQAS*

Click here to download the sequence:
Link to NCBI Protein BLAST