Transcript Information: R_Transcript_485151.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.88503126315344
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485151.p1 GENE.R_Transcript_485151~~R_Transcript_485151.p1 ORF type:internal len:83 (+),score=35.59,HMG_box|PF00505.15|6.1e-13,HMG_box_2|PF09011.6|4.8e-09 R_Transcript_485151:1-246(+)
GGAAAGACAACCTCATCTGACAAGCCTAAGAGAGCCCAATCTGCTTTGCAAATTTTCCAAGCTGCCAAGCTCGAAGAAGTCAAGAAGGATAATGAAGGAAAGAAGCCTGCTGAAATTAAGAAGATCTTGAGTGAAATGTGGAAGGAAATGGACGATGATGCCAAAAAGCCATACGTTGAATTGTCCAATCAACAAAAGGAACAAAACAAGGCTGCTAAGAAATCAAGTGCTCCTCCAAAGAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485151.p1 GENE.R_Transcript_485151~~R_Transcript_485151.p1 ORF type:internal len:83 (+),score=35.59,HMG_box|PF00505.15|6.1e-13,HMG_box_2|PF09011.6|4.8e-09 R_Transcript_485151:1-246(+)
GKTTSSDKPKRAQSALQIFQAAKLEEVKKDNEGKKPAEIKKILSEMWKEMDDDAKKPYVELSNQQKEQNKAAKKSSAPPKKK

Click here to download the sequence:
Link to NCBI Protein BLAST