Transcript Information: R_Transcript_485516.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeHomolog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.49403059803054
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485516.p1 GENE.R_Transcript_485516~~R_Transcript_485516.p1 ORF type:internal len:85 (+),score=16.71 R_Transcript_485516:1-252(+)
CATTCTTTAAGACCTGAAGATATTCAATTTCTTGCAATCAAAACTGAAGGATATTCTGGTGCTGATATTAACATATTGGTGAGAGATGCTTGCTTTGAGCCGATAAGAAATGCTCAAAACGCAACACATTTTAGAGTAATCGACAAGTTGCCTGACGGGCTGCCTGTCTACCAGCCTTGTCATCCAGATGATCCTGGTGCTCAAGCAATGGGTATGTTTAGTATACCAGGCCCTCAGCTTCGACTGAAGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485516.p1 GENE.R_Transcript_485516~~R_Transcript_485516.p1 ORF type:internal len:85 (+),score=16.71 R_Transcript_485516:1-252(+)
HSLRPEDIQFLAIKTEGYSGADINILVRDACFEPIRNAQNATHFRVIDKLPDGLPVYQPCHPDDPGAQAMGMFSIPGPQLRLKN

Click here to download the sequence:
Link to NCBI Protein BLAST