Transcript Information: R_Transcript_485539.p1


Annotated TAIR IDAT3G03960.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1024432-1027604 | Forward length=549
E-Value7E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33101224529283
Replicate 20.27197280331992
Replicate 30.059343879782778
Condition 2: 8 Hour
Replicate 10.063434883283019
Replicate 20.057929745702553
Replicate 30.047024897980277
Condition 3: 24 Hour
Replicate 10.059476184527731
Replicate 20
Replicate 30.056703898152584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485539.p1 GENE.R_Transcript_485539~~R_Transcript_485539.p1 ORF type:internal len:386 (+),score=97.44,Cpn60_TCP1|PF00118.20|8.7e-108 R_Transcript_485539:2-1156(+)
AGTTTGGCATCCAAGCAATACGGTTATGAGGACTTGCTTGCACCTTTGATTGCTAAAGCATGCATTCAAATTCTTCCAAAAGACCCAAGAGATTTCAACACTGATTTAATTAGAGTTGTTAAAATCCCAGGTGGTGGAGTTTTTGATACTGAATTGGTCAAGGGATTTGTCATCCCTAGAGCAGTTGCAGGTATGATCAAAAGAGTTGAGAAGGCAAAGGTTGGAATCTTTGTGATGGGAATGGATACTCCTAAGCCAGAGACAAAGGGAACAGTCCTCTTGAACACAGCAACCGAATTGGAGAACTATTCAAAGGGAGAGGAAGAATACCTTGAAAAAGCAATCAAAGAAATTCATGAAAGTGGAGTGAATGTAGTTGTATCAGGAGGAAACATTGCAGATATGGCTTTGCATTACTTGGAGAAATACAAGATAATGGTCATCAAGGTCCAATCTAAATTCCAATTGAGACGTTTGTGCAAGGCTACTAATGCTGTTCCTTTGGTTCGTTTGGGTAAACCTACTCCTGAAGAGATTGGTACTTGCGATTTGGTATCCCAAGAGGAAATTGGTTCCACCGTTGTCACTGTGTTCAGACAATTGGGTGAGGAATCCCAAGTGTCCACCTTGATCGTCAGAGGAAGCACCAAAAACTTGTTGGATGACATTGAAAGAGCTATCGACGATGGAATCAACAACTTCAAGCAAATGACCAAGGATGATCGTTTGGTTCCTGGTGCAGGTGCAACTGAGATTGAATTGGCAAAGGCTATCCACTCTTTTGGAGAGAGCTGTCCTGGTTTGGATCAATATGCAATTCGTAAATACGCAGAGGCTCTTGAAGTCATTCCTCGTACTCTTGCAGACAACTCTGGTGCTAGTAGCAGTTTGGAGCTCATCAGCAGTATCTATGCTCAACATCAAAACGGCGTCACCACTGCTGGTGTTGATATTGAAAACGGAGAAGTCATCGATACCTTGAAGGCTGGTATCTTTGATTCTTTGCGCAGCAAACACTGGGGTCTGAGACTTGCAACTGATGCCGTCATCACCATCCTCCGTATCGACCAGTTAATCATGGCAAAGACTTCAGGGGGCCCAAATCCACAAGCCGGAAGAGAGAACATGAAGAAAATGCAAAGAGAAAACCAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485539.p1 GENE.R_Transcript_485539~~R_Transcript_485539.p1 ORF type:internal len:386 (+),score=97.44,Cpn60_TCP1|PF00118.20|8.7e-108 R_Transcript_485539:2-1156(+)
SLASKQYGYEDLLAPLIAKACIQILPKDPRDFNTDLIRVVKIPGGGVFDTELVKGFVIPRAVAGMIKRVEKAKVGIFVMGMDTPKPETKGTVLLNTATELENYSKGEEEYLEKAIKEIHESGVNVVVSGGNIADMALHYLEKYKIMVIKVQSKFQLRRLCKATNAVPLVRLGKPTPEEIGTCDLVSQEEIGSTVVTVFRQLGEESQVSTLIVRGSTKNLLDDIERAIDDGINNFKQMTKDDRLVPGAGATEIELAKAIHSFGESCPGLDQYAIRKYAEALEVIPRTLADNSGASSSLELISSIYAQHQNGVTTAGVDIENGEVIDTLKAGIFDSLRSKHWGLRLATDAVITILRIDQLIMAKTSGGPNPQAGRENMKKMQRENQN

Click here to download the sequence:
Link to NCBI Protein BLAST