Transcript Information: R_Transcript_485569.p2


Annotated TAIR IDAT5G13070.1
Annotated Gene NameMSF1-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4148216-4149062 | Forward length=183
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27379441432078
Replicate 20.52490751040745
Replicate 30.57266843990381
Condition 2: 8 Hour
Replicate 10.12242932473623
Replicate 20
Replicate 30.18151610620387
Condition 3: 24 Hour
Replicate 10.5739451806926
Replicate 20
Replicate 30.10943852343449


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485569.p2 GENE.R_Transcript_485569~~R_Transcript_485569.p2 ORF type:5prime_partial len:200 (+),score=-27.02,PRELI|PF04707.10|1.9e-37 R_Transcript_485569:2-601(+)
TCGTTTCATCACACGATGGTGAAGCTCTTCTCCGCCGAGCACACGTTTCAACATCCGTTCGAGCGTGTGACATCGGCCTTCTGGCGGAAGTATCCGAACGATGCCGCTGCGCACGTCAAGGCGATCGACATCACCGACCGCCGGATAGATAGCGAGGGTCGTCTCATCACCAACCGCATTATGTCATGCCAATCGGCCATTCCGTCCTGGTTGCGATCAGCCGGTCTGCCGCAGACGTGCATGGTCGCCGAGACGTCGATCGTCGATCCGAAGTCGCGCACGATGGTCGTCAAGTCGTCAAACTTGAGCGGATCGAGTCTGATGGTTGTCGAGGAGACGTGCACCTACCAACAGTCGGCCATCGCACCTGCCGCTGCCACGCATTACAAGCAGGAGGCGCGCATCACCGCCTTTCTGCCCTTCCTTGCATCGAAGTTCGAGTCGTACTCGGTCGCGAACTTGCAGAGCAAGTCGAAAGAGGGCATGCAGGTGGTCGAAAACCTCTGTCAGCGCATTCGCGACTCGGCCAACGGCGCTTGCAGCTTGCTCGAATTCGCCAAGGCGCCTGGCGCATCGACTGCGGCTACGGTAGCACAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485569.p2 GENE.R_Transcript_485569~~R_Transcript_485569.p2 ORF type:5prime_partial len:200 (+),score=-27.02,PRELI|PF04707.10|1.9e-37 R_Transcript_485569:2-601(+)
SFHHTMVKLFSAEHTFQHPFERVTSAFWRKYPNDAAAHVKAIDITDRRIDSEGRLITNRIMSCQSAIPSWLRSAGLPQTCMVAETSIVDPKSRTMVVKSSNLSGSSLMVVEETCTYQQSAIAPAAATHYKQEARITAFLPFLASKFESYSVANLQSKSKEGMQVVENLCQRIRDSANGACSLLEFAKAPGASTAATVAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST