Transcript Information: R_Transcript_48558.p1


Annotated TAIR IDAT1G01970.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:338538-339905 | Forward length=409
E-Value1.6E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5074549056885
Replicate 22.4641134962893
Replicate 33.4164082967367
Condition 2: 8 Hour
Replicate 13.1729849442641
Replicate 23.82704579189
Replicate 34.304905208258
Condition 3: 24 Hour
Replicate 13.6485512709065
Replicate 23.1276406250696
Replicate 34.0136377787709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48558.p1 GENE.R_Transcript_48558~~R_Transcript_48558.p1 ORF type:complete len:409 (+),score=81.38,PPR|PF01535.16|1,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.95,PPR|PF01535.16|0.037,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|6.6e-08,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|5.3e+02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.5e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.4e+02 R_Transcript_48558:455-1681(+)
ATGACTTGTTCTTCATCTCACTTGCTCTCTTATCCTCACCTCTTACCAACCCATAATAAATCCCCACCTTTCACTTTCAGCCATTTCCTAAACAAACCCACAAATCCTTCGACCCCTAAACTTCGACCCAGATCAAATTTATCCATTTCCAATGTAGAAGTTGCAGGAAATGTCCAAATCCAAGAAGATAAAGAGAAACCCAGATTTAGATGGGTTGAGATGAAACCAGAAAAGCTCACAGAAGAGCAAAGAATGGCAATTTCTAGACTGCCCAAGAAAATGGAGAAAAGATGTAAGGCTTTGATGAGGCAAGTTATATGTTTCTCTCCTGAGAAGGGAAACTTGTCCGATATGTTGGGTTATTGGGTTAAGGTTATGAAACCCAGAAGAGCTGATTGGCTTGCTGTTCTTAAGGAATTGAGGAATATGGATCATCCCTGGTTTTTTGAGGTTTTTGAACTTGCACTTTTTGAAGAATCATTTGAAGCAAATGTTCGTGATTATACAAAATTAGTTCATCTGTATGCAAACCAAGACCGACTTCAAAATGCTGAAAAATTACTCTTGGTGATGACTAGAAGAGGCTTGAGATGCGACCAGGTTACTTTAACTACAATGATTCACATGTACAGCAAAGCCGGCAACTTTAAGCTGGCTGAAGAAACATTTGAGGAGATGAAGCTTCTTGGTCAGCCATTAGATAAAAGATCATATGGTTCAATGATCATGGCGTGCATTAGGGCTGGCATGCCAAATAGAGGAGAGGATATAATCAAAGAAATGGAACAGCAAGAGATCTATGCAGGCAGAGAAGTTTACAAAGCATTACTGAGAACATACTCCATGAAAGGTGATGCTGAAGGAGCTCAGAGGGTTTTCAATGCAATCCAAGTTGCTGGCATTTGTCCTGACATTAAGCTCTGTGGGCTCCTCATAAATGCCTACGTGCTGGCTGGTCAAAGTCAAAAAGCTCGGATTGCCTTTGAAAATATGAGAAAAGCTGGTATAGAACCTAGTGATAAATGTGTAGCGCTAGTGTTGTCCGCTTATGAAACGGACAACAGGGTTAACACTGCCCTCGACTTCCTGGTAAACCTTGAGCAAGAAGGTATCATGGTTGGTAAAGAAGCTTCTGAAGTATTGGTTGGGTGGTTTCGGAAATTAGGAATCGTGGAGGAGGTGGCAAATGTCTTGAGTGAATATGCTGCCACTGGAGTTGCGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48558.p1 GENE.R_Transcript_48558~~R_Transcript_48558.p1 ORF type:complete len:409 (+),score=81.38,PPR|PF01535.16|1,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.95,PPR|PF01535.16|0.037,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|6.6e-08,PPR_2|PF13041.2|7.3,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|5.3e+02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.5e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.4e+02 R_Transcript_48558:455-1681(+)
MTCSSSHLLSYPHLLPTHNKSPPFTFSHFLNKPTNPSTPKLRPRSNLSISNVEVAGNVQIQEDKEKPRFRWVEMKPEKLTEEQRMAISRLPKKMEKRCKALMRQVICFSPEKGNLSDMLGYWVKVMKPRRADWLAVLKELRNMDHPWFFEVFELALFEESFEANVRDYTKLVHLYANQDRLQNAEKLLLVMTRRGLRCDQVTLTTMIHMYSKAGNFKLAEETFEEMKLLGQPLDKRSYGSMIMACIRAGMPNRGEDIIKEMEQQEIYAGREVYKALLRTYSMKGDAEGAQRVFNAIQVAGICPDIKLCGLLINAYVLAGQSQKARIAFENMRKAGIEPSDKCVALVLSAYETDNRVNTALDFLVNLEQEGIMVGKEASEVLVGWFRKLGIVEEVANVLSEYAATGVAT*

Click here to download the sequence:
Link to NCBI Protein BLAST