Transcript Information: R_Transcript_485844.p1


Annotated TAIR IDAT5G51300.1
Annotated Gene Namesplicing factor-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20849881-20852295 | Reverse length=804
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.23494089842208
Condition 2: 8 Hour
Replicate 10
Replicate 20.22934237785831
Replicate 30
Condition 3: 24 Hour
Replicate 10.23546468951491
Replicate 20.2262077834931
Replicate 30.11224463941999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485844.p1 GENE.R_Transcript_485844~~R_Transcript_485844.p1 ORF type:internal len:195 (+),score=11.48,RRM_1|PF00076.18|2.8e-08,RRM_1|PF00076.18|1.6e+03,RRM_1|PF00076.18|1.4e-18,RRM_5|PF13893.2|1.6,RRM_5|PF13893.2|4.1e+03,RRM_5|PF13893.2|0.00096,RRM_6|PF14259.2|4,RRM_6|PF14259.2|0.00028 R_Transcript_485844:2-583(+)
GCGATTACTGAAGCCAAGATTTTGATTGACCCGGAAACAAATTATTCGAGAGGAATGGGTTTTGTTCGATTTGTATCGATAGATGAAGCAAATAATTCCATTGAAGCACTGAACGGCCAAATCATTGCTGGTGCATTGAAGCCTATTATTGTGAAGTTCTCTGACACGGAGGATGAGCGTAAATTTCGTAAAACTAAACAACAAAAGAGATTGAACCGATTTTCTCCTTATTCAGTTCCTCCTGTTTATCCGTATGGAAACCCATATGCCGTCCCACCGATGCAACAACAAACCTACGGCAATTATCCAGTACAACCGATGAACTTTAATTATCCACAACAAAATCCACAACAGCAATATGAACGAAATTTGTACATTTATCACCTTCCGTCTAACGCTACGGACGCATTATTATATCAAATCTTTAGTCCAATGGGTGCTATTGAATCAGTGAAGGTAATTTCTGACCCACAAACCGGCCTTTGCAAAGGCTACGGATTTGTTAAAATGGTTAATTATGTTGATGCTTGGAATGCCATTCAATATCTTAATGGTACGCAAGTTGGTGATTCTCAAATTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485844.p1 GENE.R_Transcript_485844~~R_Transcript_485844.p1 ORF type:internal len:195 (+),score=11.48,RRM_1|PF00076.18|2.8e-08,RRM_1|PF00076.18|1.6e+03,RRM_1|PF00076.18|1.4e-18,RRM_5|PF13893.2|1.6,RRM_5|PF13893.2|4.1e+03,RRM_5|PF13893.2|0.00096,RRM_6|PF14259.2|4,RRM_6|PF14259.2|0.00028 R_Transcript_485844:2-583(+)
AITEAKILIDPETNYSRGMGFVRFVSIDEANNSIEALNGQIIAGALKPIIVKFSDTEDERKFRKTKQQKRLNRFSPYSVPPVYPYGNPYAVPPMQQQTYGNYPVQPMNFNYPQQNPQQQYERNLYIYHLPSNATDALLYQIFSPMGAIESVKVISDPQTGLCKGYGFVKMVNYVDAWNAIQYLNGTQVGDSQIQ

Click here to download the sequence:
Link to NCBI Protein BLAST