Transcript Information: R_Transcript_485923.p1


Annotated TAIR IDAT5G08200.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2638385-2640508 | Forward length=409
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.14890993203048
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.12873482709494
Condition 3: 24 Hour
Replicate 10.16282132785606
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_485923.p1 GENE.R_Transcript_485923~~R_Transcript_485923.p1 ORF type:internal len:141 (+),score=29.11,LysM|PF01476.16|2.8e-06 R_Transcript_485923:3-422(+)
GGAATATATATTGAACCTGTTTCTGCCAAACAAGGAGTTATGGTCGGATGGAACTGTTGCAACATAGAAGATAGAGTCCAAATGTACTTGCCAATGCCACTCGGACAAATTGCAATCATGAAAGAGGATAGATTGAAGAGAGATTGCCCAGGATGCCATTTTGCAGAATTTCATGAGGAAGATAAATCCTACTCTAGTATAATGAGTAATTTCCCTTTTGATCCTAATTCATCAAAGAAAGAAGAAGAGAATCTTTCCCAACCCTCTGCTCCTTCCCTCGAAGAAATCCAAAAGACCATTTCTCCAGAAGAACTCAAAAAATTCCACTACATCAAGCCTGGTGATACTTTGGCTGGAGTTGCACTAAAATATAATGTTTCTACTTCTTCTTTAAAGCAACTCAACAATTTGTACAGCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_485923.p1 GENE.R_Transcript_485923~~R_Transcript_485923.p1 ORF type:internal len:141 (+),score=29.11,LysM|PF01476.16|2.8e-06 R_Transcript_485923:3-422(+)
GIYIEPVSAKQGVMVGWNCCNIEDRVQMYLPMPLGQIAIMKEDRLKRDCPGCHFAEFHEEDKSYSSIMSNFPFDPNSSKKEEENLSQPSAPSLEEIQKTISPEELKKFHYIKPGDTLAGVALKYNVSTSSLKQLNNLYSE

Click here to download the sequence:
Link to NCBI Protein BLAST