Transcript Information: R_Transcript_48647.p1


Annotated TAIR IDAT5G32450.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12079707-12081317 | Forward length=267
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.354138207157
Replicate 27.5535471009853
Replicate 314.246873382973
Condition 2: 8 Hour
Replicate 15.0763378549167
Replicate 25.1811799388113
Replicate 37.6369581268701
Condition 3: 24 Hour
Replicate 110.918957096103
Replicate 211.162112731207
Replicate 310.810390729504


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48647.p1 GENE.R_Transcript_48647~~R_Transcript_48647.p1 ORF type:internal len:164 (-),score=35.78,RRM_1|PF00076.18|3.9e-08 R_Transcript_48647:1-489(-)
GGAAAAAAAAAAGCACAAGCAAAGCAAATAGACATTTACATACATAGCTGGAAAAAAAGAGGGAGTTTTGTGATTTTGGCAGACAAAAAGATTTTTTTGGGTTTGCCCATAATGCAGACTAAAACAGTTAAGGTGGGCAACTTATCAGATCTAGCCACTAAAAGAGAAATTCATGATTTTTTCTCTTTTTCTGGTGATATTGAACACATTGAGATCCAAAGTGAATCAGGGAAATCAAGGACTGCTTATGTTACATTTAAACAAGAAAGAGCTCTTGAAATTGCCTTGATGCTCTCGGGGGCGACTTTAGTTGATCGCATTGTGACCATAACTCTTGCAGAAGATTATGTTGTAAAACCGGAGATGGAGGTAAGAATTGTTGAGAATGCTGTGAGCAGGGCTCAAACAGAAGATGCATCAACAGATGCTGAGGCTAAGTCTGGATCAACTAATGGAAAAGTATATGTTAATAAAGCTCAGGAAGTTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48647.p1 GENE.R_Transcript_48647~~R_Transcript_48647.p1 ORF type:internal len:164 (-),score=35.78,RRM_1|PF00076.18|3.9e-08 R_Transcript_48647:1-489(-)
GKKKAQAKQIDIYIHSWKKRGSFVILADKKIFLGLPIMQTKTVKVGNLSDLATKREIHDFFSFSGDIEHIEIQSESGKSRTAYVTFKQERALEIALMLSGATLVDRIVTITLAEDYVVKPEMEVRIVENAVSRAQTEDASTDAEAKSGSTNGKVYVNKAQEVV

Click here to download the sequence:
Link to NCBI Protein BLAST