Transcript Information: R_Transcript_486480.p2


Annotated TAIR IDAT2G41840.1
Annotated Gene NameRibosomal protein S5 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17460016-17461398 | Reverse length=285
E-Value1.2E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28081478391875
Replicate 20.56528501120802
Replicate 30.088102836908279
Condition 2: 8 Hour
Replicate 10
Replicate 20.086003391696868
Replicate 30.069813887001488
Condition 3: 24 Hour
Replicate 10.52979555140856
Replicate 20.084827918809913
Replicate 30.16836695912998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_486480.p2 GENE.R_Transcript_486480~~R_Transcript_486480.p2 ORF type:5prime_partial len:260 (+),score=-29.78,Ribosomal_S5|PF00333.16|5.6e-25,Ribosomal_S5_C|PF03719.11|8.6e-24 R_Transcript_486480:2-781(+)
TTCCGTGGTGGCTTCGAGGGCCGCGGTCGCGGTGAGCGCCGTGGTCGCGGTGGTCGTCGTGGTCGTCGCGGTGGTGCCGATGAGAAGAAGGAGTGGGTGCCGGTGACGAAGCTCGGTCGTCTCGTGAAGGAGGGCAAGATCAAGTCGCTCGAAGAGATCTACCTCTTCTCGATTGCGATTAAGGAGGCGGAGATCATCGATCACTTCCTCGGTGAGTCGCTCAAGGATGAGGTCGTCCAGCTCTCCCCGGTCCAGAAGCAGACTCAGGCCGGTCAGCGCACTCGCTTCCGCGCGTTCATCCTCGTCGGTGACGCGAAGGGTCACGTCGGTATCGGCCAGAAGGTGTCGGGTGAGGTCGCGAACGCGATCCGCGGTGCGCTCATCGATGCGAAGCTCTCGCTCGTCCCGGTCCGCACTGGCTGGTGGGGCTCGCGCTTCGGCGCGCCGCACACTGTGCCGATGAAGGTCACCGGCAAGTGCGGTTCGGTCACGTTCCGTGTCATCCCGGCGCCGAAGGGTACGGGTATCGTCGCGGCGAAGACCCCGAAGAAGCTCCTGACGGCGGCCGGCTATGCCGACTGCTACACCGAGTCGCGCGGTAAGACGCGTACTCGTGGTAACTTCGTCAAGGCTGCGTTCCAGGCCGTCGCGAAGACGTACTCGTACCTCTCGCCGGATCTCTGGGCCGTCCAGAAGTTCACCAAGTCGCCTTACCAGGAGTACTCGGACTTCCTCCGCGATGCCAAGAACAACCGCTCGTACAAGAAGGCCGACTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_486480.p2 GENE.R_Transcript_486480~~R_Transcript_486480.p2 ORF type:5prime_partial len:260 (+),score=-29.78,Ribosomal_S5|PF00333.16|5.6e-25,Ribosomal_S5_C|PF03719.11|8.6e-24 R_Transcript_486480:2-781(+)
FRGGFEGRGRGERRGRGGRRGRRGGADEKKEWVPVTKLGRLVKEGKIKSLEEIYLFSIAIKEAEIIDHFLGESLKDEVVQLSPVQKQTQAGQRTRFRAFILVGDAKGHVGIGQKVSGEVANAIRGALIDAKLSLVPVRTGWWGSRFGAPHTVPMKVTGKCGSVTFRVIPAPKGTGIVAAKTPKKLLTAAGYADCYTESRGKTRTRGNFVKAAFQAVAKTYSYLSPDLWAVQKFTKSPYQEYSDFLRDAKNNRSYKKADY*

Click here to download the sequence:
Link to NCBI Protein BLAST