Transcript Information: R_Transcript_486482.p1


Annotated TAIR IDAT5G03520.1
Annotated Gene NameRAB GTPase Homolog 8C
Annotated Gene Symbol(s)ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
Annotation TypeHomolog
Chromosome Positionchr5:883679-885158 | Forward length=216
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11626089780076
Replicate 20.13373439755604
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14242599898844
Replicate 30
Condition 3: 24 Hour
Replicate 10.14622807151404
Replicate 20
Replicate 30.13941213176368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_486482.p1 GENE.R_Transcript_486482~~R_Transcript_486482.p1 ORF type:internal len:157 (+),score=17.16,Ras|PF00071.18|6.5e-47,Roc|PF08477.9|4.5e-34,Arf|PF00025.17|7.2e-18,Gtr1_RagA|PF04670.8|1.9e-07,MMR_HSR1|PF01926.19|8.7e-07 R_Transcript_486482:3-470(+)
CATTTGTTAAAACAAACAAACAAAAAAGTTCCTCAAAAAATGAACAATTACAACACATCTTTCAGCTCCCCCATTCAAACCAGCAAAACTGACAACCAAATTCTCAAACTCTTGATGATTGGAGAGTCTGGTGTTGGAAAAAGCGCTATTTTAACAAGATACTGTGATTCAACTTTTGTATCTACTTACCTTTCAACCATTGGTGTGGATTTCAAGATTAAGACTGTCGAGATCGATGGAAAGCCAATTGATTTGCAACTCTGGGATACTGCAGGCCAGGAGAGATTTCGTTCCATAACCACATCTTATTATCGCGGTGCCCAGGGAATCATCTTGGTGTTTGATTTGACCGATAGAAGCACCTTTACCCAATTGAACAACTGGTTGGAGCAAATTTCAGAGTATTCTCTTGGGGTAAAATTGATCTTGGTTGGAAACAAGAGCGATCTCAAAGATAAGAGACAAGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_486482.p1 GENE.R_Transcript_486482~~R_Transcript_486482.p1 ORF type:internal len:157 (+),score=17.16,Ras|PF00071.18|6.5e-47,Roc|PF08477.9|4.5e-34,Arf|PF00025.17|7.2e-18,Gtr1_RagA|PF04670.8|1.9e-07,MMR_HSR1|PF01926.19|8.7e-07 R_Transcript_486482:3-470(+)
HLLKQTNKKVPQKMNNYNTSFSSPIQTSKTDNQILKLLMIGESGVGKSAILTRYCDSTFVSTYLSTIGVDFKIKTVEIDGKPIDLQLWDTAGQERFRSITTSYYRGAQGIILVFDLTDRSTFTQLNNWLEQISEYSLGVKLILVGNKSDLKDKRQV

Click here to download the sequence:
Link to NCBI Protein BLAST