Transcript Information: R_Transcript_48650.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value6.5E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.595998724174
Replicate 210.498150208149
Replicate 314.148279103506
Condition 2: 8 Hour
Replicate 17.9218974829323
Replicate 210.917371722461
Replicate 312.812901614391
Condition 3: 24 Hour
Replicate 121.877439828753
Replicate 216.606312576435
Replicate 318.797675789924


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48650.p1 GENE.R_Transcript_48650~~R_Transcript_48650.p1 ORF type:complete len:170 (+),score=45.79,RNase_PH|PF01138.17|2.2e-25 R_Transcript_48650:135-644(+)
ATGGAGGTTGATAGAGAAGATGGGCGTACCCCAAATCAATTGAGACCATTATCTTGTTCTAGAAACGTTCTCAACCGTGCTCATGGCTCTGCTAGTTGGTCCCAAGGGGATACGAAAGTCTTAGCAGCAGTTTATGGGCCAAAAGCTGGGACAAAGAAGAATGAAAATCCTGAGAAGGCTTCTATTGAAGTCATTTGGAAAACCAAGACTGGACAAATTGGGAAGCTGGAAAAGGAGTATGAGATGATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATTGTGCAGGTTGTCAACGACGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGGTGATTCAATCTTCCCTTTCTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48650.p1 GENE.R_Transcript_48650~~R_Transcript_48650.p1 ORF type:complete len:170 (+),score=45.79,RNase_PH|PF01138.17|2.2e-25 R_Transcript_48650:135-644(+)
MEVDREDGRTPNQLRPLSCSRNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKTKTGQIGKLEKEYEMILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAVAICCCLTETGYVILDPTKQEEQVIQSSLSL*

Click here to download the sequence:
Link to NCBI Protein BLAST