Transcript Information: R_Transcript_48652.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value5.4E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1636665858744
Replicate 24.696540882593
Replicate 34.2196621887649
Condition 2: 8 Hour
Replicate 17.8934696211514
Replicate 29.7093302731464
Replicate 37.4039464372631
Condition 3: 24 Hour
Replicate 13.1718023143539
Replicate 20.87060232462805
Replicate 34.3199417145192


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48652.p1 GENE.R_Transcript_48652~~R_Transcript_48652.p1 ORF type:complete len:152 (+),score=40.67,RNase_PH|PF01138.17|1.5e-25 R_Transcript_48652:204-659(+)
ATGGAGGTTGATAGAGAAGATGGGCGTACCCCAAATCAATTGAGACCATTATCTTGTTCTAGAAACGTTCTCAACCGTGCTCATGGCTCTGCTAGTTGGTCCCAAGGGGATACGAAAGTCTTAGCAGCAGTTTATGGGCCAAAAGCTGGGACAAAGAAGAATGAAAATCCTGAGAAGGCTTCTATTGAAGTCATTTGGAAAACCAAGACTGGACAAATTGGGAAGCTGGAAAAGGAGTATGAGATGATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATTGTGCAGGTTGTCAACGACGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGGTATGCATTGCAGGACCTACTTTCTCATTTGTGCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48652.p1 GENE.R_Transcript_48652~~R_Transcript_48652.p1 ORF type:complete len:152 (+),score=40.67,RNase_PH|PF01138.17|1.5e-25 R_Transcript_48652:204-659(+)
MEVDREDGRTPNQLRPLSCSRNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKTKTGQIGKLEKEYEMILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAGMHCRTYFLICAS*

Click here to download the sequence:
Link to NCBI Protein BLAST