Transcript Information: R_Transcript_48662.p1


Annotated TAIR IDAT3G46210.1
Annotated Gene NameRibosomal protein S5 domain 2-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16976960-16978489 | Reverse length=239
E-Value5.8E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9768660433043
Replicate 29.0352932119316
Replicate 310.139047788461
Condition 2: 8 Hour
Replicate 16.7235776699403
Replicate 211.455369795689
Replicate 39.6709400846324
Condition 3: 24 Hour
Replicate 110.25574175336
Replicate 29.2198213395036
Replicate 310.226222681583


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48662.p1 GENE.R_Transcript_48662~~R_Transcript_48662.p1 ORF type:complete len:244 (+),score=56.74,RNase_PH|PF01138.17|3.6e-25 R_Transcript_48662:135-866(+)
ATGGAGGTTGATAGAGAAGATGGGCGTACCCCAAATCAATTGAGACCATTATCTTGTTCTAGAAACGTTCTCAACCGTGCTCATGGCTCTGCTAGTTGGTCCCAAGGGGATACGAAAGTCTTAGCAGCAGTTTATGGGCCAAAAGCTGGGACAAAGAAGAATGAAAATCCTGAGAAGGCTTCTATTGAAGTCATTTGGAAACCCAAGACTGGACAAAGTGGTAAGCTGGAAAAAGAGTATGAGATGATACTGAAGAGAACATTACAGAGCATCTGTATTTTGACTATCAATCCCAACACAACCACCTCAATAATTGTGCAGGTTGTCAACGACGATGGTGCTCTTCTTCCTTGTGCTATTAATGCAGCCTGTGCTGCATTGATTGATGCTGGAATTCCTCTGAAGCATCTTGCTGTTGCAATATGTTGTTGTTTGACTGAAACGGGATATGTTATACTGGATCCAACAAAGCAAGAAGAGCAGAAAATGAAGGCATTCGTATATTTGGTGTTTCCAAATTCAGTTCTATCAGTCCTGTGTCAAGGTTCTTCATGTATAGATGGTGAGCCTATGGAGAATGGGATCATCACATCTCTTACTCATGGAGCAATGTCAGTGGAAGATTATTTTCACTGTTTAGAAAGAGGGCGAGCTGCAACATCAAAGCTGTCTGATTTTCTGAGAAGAAGCTTACAAACTTGGCTTCCTAGCGATTTGCTCGGGCAGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48662.p1 GENE.R_Transcript_48662~~R_Transcript_48662.p1 ORF type:complete len:244 (+),score=56.74,RNase_PH|PF01138.17|3.6e-25 R_Transcript_48662:135-866(+)
MEVDREDGRTPNQLRPLSCSRNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQSGKLEKEYEMILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAINAACAALIDAGIPLKHLAVAICCCLTETGYVILDPTKQEEQKMKAFVYLVFPNSVLSVLCQGSSCIDGEPMENGIITSLTHGAMSVEDYFHCLERGRAATSKLSDFLRRSLQTWLPSDLLGQT*

Click here to download the sequence:
Link to NCBI Protein BLAST