Transcript Information: R_Transcript_48683.p1


Annotated TAIR IDAT3G54560.1
Annotated Gene Namehistone H2A 11
Annotated Gene Symbol(s)HTA11
Annotation TypeOrtholog
Chromosome Positionchr3:20196532-20197466 | Forward length=136
E-Value8.9E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1108.57131590103
Replicate 2117.89033863373
Replicate 3109.27362231054
Condition 2: 8 Hour
Replicate 171.825203845253
Replicate 256.150658845644
Replicate 370.051771357197
Condition 3: 24 Hour
Replicate 1155.60291565444
Replicate 2145.56470867781
Replicate 3158.88852291229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48683.p1 GENE.R_Transcript_48683~~R_Transcript_48683.p1 ORF type:complete len:135 (+),score=36.94,Histone|PF00125.20|7.1e-20,Histone_H2A_C|PF16211.1|1.1e-10 R_Transcript_48683:212-616(+)
ATGGCAGGGAAGGGTGGTAAGGGGCTTTTGGCTGGTAAAACTACCGCCGCAAGCAAGGATAAGGAGAAGAAGAGGCCTGTCTCTCGCTCGTCTCGAGCTGGTCTCCAGTTCCCCGTTGGTCGAATTCACCGACAGCTCAAAACAAGAGTCTCGGCCAATGGGCGTGTGGGGGCCACAGCTGCTGTCTACTCTGCTGCTATTCTGGAGTACCTGACAGCAGAAGTGCTGGAGCTTGCTGGAAATGCTAGCAAAGATCTCAAAGTGAAGAGGATTACTCCAAGGCATCTACAACTTGCCATTCGAGGGGATGAGGAGCTCGACACTCTCATCAAGGGCACCATTGCAGGAGGTGGTGTTATCCCACACATCCACAAGTCCCTCATCAACAAATCGGCCAAAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48683.p1 GENE.R_Transcript_48683~~R_Transcript_48683.p1 ORF type:complete len:135 (+),score=36.94,Histone|PF00125.20|7.1e-20,Histone_H2A_C|PF16211.1|1.1e-10 R_Transcript_48683:212-616(+)
MAGKGGKGLLAGKTTAASKDKEKKRPVSRSSRAGLQFPVGRIHRQLKTRVSANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSAKD*

Click here to download the sequence:
Link to NCBI Protein BLAST