Transcript Information: R_Transcript_486925.p1


Annotated TAIR IDAT5G35590.1
Annotated Gene Nameproteasome alpha subunit A1
Annotated Gene Symbol(s)PAA1
Annotation TypeHomolog
Chromosome Positionchr5:13765417-13767768 | Reverse length=246
E-Value8E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72432384740947
Replicate 20.083318652445627
Replicate 30
Condition 2: 8 Hour
Replicate 10.097166130743037
Replicate 20.088733658099943
Replicate 30
Condition 3: 24 Hour
Replicate 10.091102409633747
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_486925.p1 GENE.R_Transcript_486925~~R_Transcript_486925.p1 ORF type:5prime_partial len:252 (+),score=53.31,Proteasome|PF00227.22|9e-50,Proteasome_A_N|PF10584.5|1.5e-11 R_Transcript_486925:3-758(+)
TATCAGAATAAAGCAAGGATGAGCAGAGGTACAGCAGGTTATGATAGAGAAATGACTGTCTTTTCTCCAGAGGGCAGATTATATCAAATTGAATATGCTTCCAAAGCAATTTTGACAGTTGAACAAACATCAATTGGAGTGAGAGGAGATGATTCTGTTGTCATCATTACCCCAAAGAAAGTTCCAGATATTTTTGTCGATCCATCTTCTGTCACACATATGTTCAACCTTACTCCAACCATCGGATGTGTCATGACTGGATTGATCTCTGATGCAAGAGTTGCAGTCCAAAGAGCAAGACATGAAGCATCCAAATTCAAACATAAATATGGTTATGACATCACTCCAGAAGCATTGGCAAAGAGAATTGCAGATATCAATCAAGTTTATACTCAACACGCATACATGAGACCTCTCGGTGTCTCCATGATCTTGATTGGAATGGACAAAGAATTGGGACCTCAATTGTTTAAATGTGAGCCTGCAGGAACCTACTTTGGATTCAAGGCTACTGTTAGCGGAAAGAAAGAACAAGAAGCAACCAACTTTTTGGAGAAGAAGGTGAGAAACAATCCTAAATGGGATGAAAATCAAACCATCGAAGTAGCAATCGATTGCCTCCAAAATGTTCTCTCCACTGATTTCAAAGCTTCTGAAATTGAAATCTGTGTTGTATCTGCAAAGGATCCTCGTTTCAGAAGACTTACTCTCGAAGAGGTTGACGAAAGACTCATTTCTCTTTCTGAGAGGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_486925.p1 GENE.R_Transcript_486925~~R_Transcript_486925.p1 ORF type:5prime_partial len:252 (+),score=53.31,Proteasome|PF00227.22|9e-50,Proteasome_A_N|PF10584.5|1.5e-11 R_Transcript_486925:3-758(+)
YQNKARMSRGTAGYDREMTVFSPEGRLYQIEYASKAILTVEQTSIGVRGDDSVVIITPKKVPDIFVDPSSVTHMFNLTPTIGCVMTGLISDARVAVQRARHEASKFKHKYGYDITPEALAKRIADINQVYTQHAYMRPLGVSMILIGMDKELGPQLFKCEPAGTYFGFKATVSGKKEQEATNFLEKKVRNNPKWDENQTIEVAIDCLQNVLSTDFKASEIEICVVSAKDPRFRRLTLEEVDERLISLSERD*

Click here to download the sequence:
Link to NCBI Protein BLAST