Transcript Information: R_Transcript_486950.p1


Annotated TAIR IDAT4G21280.2
Annotated Gene Namephotosystem II subunit QA
Annotated Gene Symbol(s)PSBQ, PSBQA, PSBQ-1
Annotation TypeHomolog
Chromosome Positionchr4:11334446-11335587 | Forward length=224
E-Value4E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25118753607411
Replicate 20.48156652330959
Replicate 30.63046066778401
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.31593312698675
Replicate 20.2023418246842
Replicate 30.10040231507751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_486950.p1 GENE.R_Transcript_486950~~R_Transcript_486950.p1 ORF type:complete len:218 (+),score=3.70,PsbQ|PF05757.7|4.9e-82 R_Transcript_486950:21-674(+)
ATGGCACAGGCAATGGCGTCCATGACCGGGCTGTCGCAGGGCGTGCAGCTGCCGGCCGGGCCCAGGCGCGCCGGCGGCAGGTCCAGGCTCGCCGTCGTCAGGGCCGACGCCGCCGCCGCCGACGTCCAGACCGGCCGCCGCGCCGTGCTCGGCCTCGTCGCCACCGGGATCGCCGGCGGCGCCCTCGCGCAGGCGGCGCTCGCCGAGGCCGCCAAGCCCATCAAGCTCGGCCCCCCGCCACCGCCCTCCGGTGGACTCCCTGGGACGCTGAACTCGGACCAGGCGAGGGACACGGACCTGCCGCTGAGGGAAAGGTTCTACCTGCAGCCGCTGCCGCCGGCGGAGGCGGCGGCGAGGGCGAAGGAGTCGGCCCAGGACATCATCAACCTCAAGCCGCTCATCGAGAAGAAGCAGTGGCCGTTCGTCAGGGACGACCTCCGCCTCAGGGCCTCCTACCTGCGCTACGACCTCAAAACCGTCATCAACTCCAAGCCCAAGGACGAGAAGAAGGGCCTCAAGGACCTCACCGGCAAGCTCTTCGCCACCATTGACGGGCTTGACCATGCAGCCAAGATCAAGAGCCCCGAAGAGGCGGAGAAGTACTACACGTTGACCAAATCTGCTCTTGGCGATGTCCTCGCCAAGCTAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_486950.p1 GENE.R_Transcript_486950~~R_Transcript_486950.p1 ORF type:complete len:218 (+),score=3.70,PsbQ|PF05757.7|4.9e-82 R_Transcript_486950:21-674(+)
MAQAMASMTGLSQGVQLPAGPRRAGGRSRLAVVRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG*

Click here to download the sequence:
Link to NCBI Protein BLAST