Transcript Information: R_Transcript_48714.p2


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6046559081071
Replicate 21.3843714560197
Replicate 32.5172239116651
Condition 2: 8 Hour
Replicate 10.80722631694215
Replicate 22.2115157864909
Replicate 32.1941507343325
Condition 3: 24 Hour
Replicate 13.2796867468149
Replicate 21.9389238585123
Replicate 33.6078634099281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48714.p2 GENE.R_Transcript_48714~~R_Transcript_48714.p2 ORF type:3prime_partial len:91 (+),score=2.35 R_Transcript_48714:329-598(+)
ATGCACTTGGGCCGTTTCTGGGACGGCCCAGCCGTTTCCTCGCTGTACCACCTAGCTCCGAAACGTTTCGTTGACCGGTCAAAGACGTTTCCACGCCGTTTCTTGGCGTTTCCCGTTTCCGTACTGGTACCAGTACGAGGTACGGTGCCCCAGGGCCGTTTCCGTGCTTCAGAGCCCCAGGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGGAGAAAAGAAGCCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48714.p2 GENE.R_Transcript_48714~~R_Transcript_48714.p2 ORF type:3prime_partial len:91 (+),score=2.35 R_Transcript_48714:329-598(+)
MHLGRFWDGPAVSSLYHLAPKRFVDRSKTFPRRFLAFPVSVLVPVRGTVPQGRFRASEPQVNKAQNAQKGLNPSRFKDAKALTKRRKEAS

Click here to download the sequence:
Link to NCBI Protein BLAST