Transcript Information: R_Transcript_487236.p1


Annotated TAIR IDAT5G42620.2
Annotated Gene Namemetalloendopeptidases;zinc ion binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17066630-17071766 | Forward length=889
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17112150895049
Replicate 20.065613438800932
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.14348629517315
Replicate 20.41353610419832
Replicate 30.13679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_487236.p1 GENE.R_Transcript_487236~~R_Transcript_487236.p1 ORF type:internal len:320 (+),score=46.57,Peptidase_M8|PF01457.12|2.3e-30,Peptidase_M8|PF01457.12|0.0031 R_Transcript_487236:3-959(+)
TCCTATATCGCAGCTGCCAAGTTCTGTCAAACTGCTTCTGGGACATTCAGACCCATTATTGGCAGAACAAATATCAACAGCAACAAGCTTCTTGAATCTAGAGGCAATGCGATTGTCCATGAGAAGAACTTGGTTACCATGATGCACGAAATGATGCATGCTCTTGGGTTCACAAGCTATTTATTCCCATATTTCATTGATGAGAACGGAAGGAAAAGAACTGGCCATATCAAGACCTTTAATATTGGTGGACAGACTAGAACTGTCATCGATGTCCCTGTTCTGACCCAAAAACTCAGAAACTACTATGGATGCTCCTCATTACAAGGAGCTATCATGGAAAACAATGGAGGCGATGGTACTGCTGTTTCTCATTTCGAGAGAAAGTACTTTGGCTACGAAGCCATGACTTCTGGTAGTATCGTCGGCAAAAGATTTTCTGAGTTCAGTTTGACCATGCTCGAAGCAACAGGATGGTACGATATTGATTACAGTTATGCTGAACCTTTCTCTTGGGGACAAGGAAGCGGCTGTAACTTCATGAGTACTTCTTGCAGCAATGCTGCCTCTAGATTTGACGAATTCTGCACTTGTAGCAGCAGAGGATGCGCTTCTACTGGTAGAGGAGGCGGTTCATGCAACAATGACCAAAATATGGATGGCTGTAAATACATATTCCCATTCGACGACAATGACTGCGAAAATGCAGACGCTGCTGATTATGCCAGACTTCCTGACTTGCAAGTCTTTGGAAGTGGAAAAGGCAGCAAATGCTTCACTGGTACCCTGAATACCAGAAAATCAAGCAATGGTCAGACTAGTTTCTGCTTCAAGTCCAACTGTGTCGGAAGTGGATCTAACACTGTAGTCGAAGTCCAAGTTGGCAGCCACAAGATCACTTGTACTCAAGAAGGTCCTCAAAGTATCGATGGATACTATGGAACTGTTAATTGCCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_487236.p1 GENE.R_Transcript_487236~~R_Transcript_487236.p1 ORF type:internal len:320 (+),score=46.57,Peptidase_M8|PF01457.12|2.3e-30,Peptidase_M8|PF01457.12|0.0031 R_Transcript_487236:3-959(+)
SYIAAAKFCQTASGTFRPIIGRTNINSNKLLESRGNAIVHEKNLVTMMHEMMHALGFTSYLFPYFIDENGRKRTGHIKTFNIGGQTRTVIDVPVLTQKLRNYYGCSSLQGAIMENNGGDGTAVSHFERKYFGYEAMTSGSIVGKRFSEFSLTMLEATGWYDIDYSYAEPFSWGQGSGCNFMSTSCSNAASRFDEFCTCSSRGCASTGRGGGSCNNDQNMDGCKYIFPFDDNDCENADAADYARLPDLQVFGSGKGSKCFTGTLNTRKSSNGQTSFCFKSNCVGSGSNTVVEVQVGSHKITCTQEGPQSIDGYYGTVNCP

Click here to download the sequence:
Link to NCBI Protein BLAST