Transcript Information: R_Transcript_487523.p1


Annotated TAIR IDAT5G15300.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4968384-4970030 | Reverse length=548
E-Value4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.099982382934753
Replicate 30
Condition 2: 8 Hour
Replicate 10.11659935689164
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.1093228915605
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_487523.p1 GENE.R_Transcript_487523~~R_Transcript_487523.p1 ORF type:3prime_partial len:210 (+),score=32.94,PPR_2|PF13041.2|69,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|4.5e+03,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|2.3e-06,PPR|PF01535.16|30,PPR|PF01535.16|8.3,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|4.4e-07,PPR|PF01535.16|6.8e-06,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.58,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|0.2,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|8.7e+02,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|11 R_Transcript_487523:55-681(+)
ATGAAGCTTGCACACCAATTGTTCGATGAAATGCCTGAAAGAGACACTGTCTCTTGGAATACTTGGCTGTCTCTTTTGCACAAGATTAAAGACCCACAAGGAGCTTACAAGTCTTATCTCCATCTACAAAGATCTGGTCCACGACCCAATAATTACACATTTTCAATCATTATCACCTCAATTCTGGGTAGTATTTTCAATGTGCTAATCCCTCAGCTACATGCTCAAGTTGTTACTTTGGGTTATAATTCCAGTGAGTTTGTTGGCACAGCACTAATGAGAGGGTATACCAATTTGGGGGACCATGCTGCTTTAGGGTGTGTATTTGAGGATGTATTAGAGAAGTGTGTCAGTTTGTGGAACGCGTTAATTTTGGGTTATATGGATTTGGGTTTAGCCCAAGAGGCTCAGAGAACATTCAACAAGATGCCCGAGAAGAATGTGGTTTCTTGGACTACCATGGTTGATGGGTATTTGAAGAACAAACAAGTTAACAAGGCTCGATATGTGTTTGACAAGATGGATCAGAAGAATGTCGTGTCTTGGACTGTAATGATTTCTGGATATGTAAGAGTAGAAAACTACTCGGATGCCTTGCGTTTATATCTTTTGATGGCAAGATCAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_487523.p1 GENE.R_Transcript_487523~~R_Transcript_487523.p1 ORF type:3prime_partial len:210 (+),score=32.94,PPR_2|PF13041.2|69,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|4.5e+03,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|2.3e-06,PPR|PF01535.16|30,PPR|PF01535.16|8.3,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|4.4e-07,PPR|PF01535.16|6.8e-06,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.58,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|0.2,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|8.7e+02,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|11 R_Transcript_487523:55-681(+)
MKLAHQLFDEMPERDTVSWNTWLSLLHKIKDPQGAYKSYLHLQRSGPRPNNYTFSIIITSILGSIFNVLIPQLHAQVVTLGYNSSEFVGTALMRGYTNLGDHAALGCVFEDVLEKCVSLWNALILGYMDLGLAQEAQRTFNKMPEKNVVSWTTMVDGYLKNKQVNKARYVFDKMDQKNVVSWTVMISGYVRVENYSDALRLYLLMARSG

Click here to download the sequence:
Link to NCBI Protein BLAST