Transcript Information: R_Transcript_48767.p1


Annotated TAIR IDAT5G61920.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24864830-24865628 | Forward length=238
E-Value9.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.450142746665
Replicate 231.149116736021
Replicate 334.812213057311
Condition 2: 8 Hour
Replicate 126.257868331585
Replicate 228.465991028088
Replicate 333.496886704069
Condition 3: 24 Hour
Replicate 140.553758162096
Replicate 230.543631555701
Replicate 335.855516230509


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48767.p1 GENE.R_Transcript_48767~~R_Transcript_48767.p1 ORF type:complete len:304 (+),score=83.61 R_Transcript_48767:2086-2997(+)
ATGTCAGCAAGAGGACGTCCATCAGCACCTGGGATGATGCGGCATGGTCCCCCTCCTGGAACAATTGCTTCAACTGGCCATCTCCCTCCAGATTTGGCTGAAAAAGAGCTGGCTGCCCAGGTTGCAGAAATAGAGCATCTTGTGATGGAAAATCGGAGGTTGGCGGCATCACAGGTTGCTTTACGGCAGGATCTTGTCGGTGCTCATGACGAAATACAAAGACTTAGGGCACACATTAGGAGTACCCAGACAGAGAGTGATATTCAAGTCCGCGTCTTACTGGATAAGATTGCCAACATGGAGTCAGATATCAAGGCTGGGGAGAGTGTAAACAAGGATCTGGAACAGGCTCACAAGGAGGCACAAAGTTTAGTAACAGCTAGACAAGAACTGATGGTGAAGATTCAACAGGCCAGTCAGGAGCTCGAGAAGTGTCGTGTTGATGCAAAAAAGATTCCTGATATGCTCTCTGAACTGGATAGTATGAGACTGGAACACCAGCGATTGCGTTCTGCCTTTGAGAATGAAAAGCACATGAGCCTTGACCTTGTTGAGCACATGCAAGCAATGGAAAGGAAGTTGATAGGAATGATAAGGGAGGTAGAGAGATTACGAGCTGAAGTACTGAATGCGGAGAAAAGAGGACATGCTCCTTATGGGGGTGCATACCGTAGTCCAAACCCTCAATATCCCCCTTCTATGCAAGGCAATGGGCCCTATTATGATCCTTATGGAAGAGCTCATGTTCATATGGGGACAAGTACAGCGATGGAAGGAATGGCACTGCTACCGCATGCCAATGCCAACGGCCCCCCTCCTGCCGTTGGCGTCATGCCTGGTGCACCTGTTTCAGCTGCTGCTGCTTCTATGGCTTGGGGAGGTGCTTATGATCCGAACATTGCTGGGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48767.p1 GENE.R_Transcript_48767~~R_Transcript_48767.p1 ORF type:complete len:304 (+),score=83.61 R_Transcript_48767:2086-2997(+)
MSARGRPSAPGMMRHGPPPGTIASTGHLPPDLAEKELAAQVAEIEHLVMENRRLAASQVALRQDLVGAHDEIQRLRAHIRSTQTESDIQVRVLLDKIANMESDIKAGESVNKDLEQAHKEAQSLVTARQELMVKIQQASQELEKCRVDAKKIPDMLSELDSMRLEHQRLRSAFENEKHMSLDLVEHMQAMERKLIGMIREVERLRAEVLNAEKRGHAPYGGAYRSPNPQYPPSMQGNGPYYDPYGRAHVHMGTSTAMEGMALLPHANANGPPPAVGVMPGAPVSAAAASMAWGGAYDPNIAGK*

Click here to download the sequence:
Link to NCBI Protein BLAST