Transcript Information: R_Transcript_48772.p1


Annotated TAIR IDAT3G19240.1
Annotated Gene NameVacuolar import/degradation, Vid27-related protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6664383-6666423 | Forward length=648
E-Value2e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.473853178459
Replicate 225.683547909845
Replicate 333.134210651315
Condition 2: 8 Hour
Replicate 126.245552489326
Replicate 226.771514497933
Replicate 337.274637711284
Condition 3: 24 Hour
Replicate 147.98673162121
Replicate 242.289441358997
Replicate 347.356425278226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48772.p1 GENE.R_Transcript_48772~~R_Transcript_48772.p1 ORF type:complete len:654 (+),score=150.23,VID27|PF08553.6|2.5e+02,VID27|PF08553.6|5.4e-51 R_Transcript_48772:537-2498(+)
ATGGGAGGTGCTCAAAGCCGTGAAGGTCTAGACTTATCAGATTCCGACGAATACGAATCGGAAGAAGACAGCCAAAGAGATGAACCTGAAGAAGAAGATTACCAAACTTCTGAAGAACAATCAACCCCTACCCCTTCTTCTTCTTCAATTGATGATGTTGATTCAAGACTCAAAGCTCTTAAACTCAAATACTCTACCAAAACCGCCACTTCTAACAACAAACAACATCATTCAACCCCACCTCCTTCAAATGTCAAGAACCCAGTTAAGCTCTACCTTCATATTGGTGGAAATACTCCTAATGCCAAATGGGTTGTTTCTGATAAGCTCACTCATTACTCCTTTGTGAAATCAACTCCTCAAAATGGGGAAAATGAGAGTGACCCAGATGAGGATTATGAAGATGATGAAGTGGGTAAGTCTTGGTTTTTGAAAATTGGGGCGAAAATTAGGGCTAGGGTTTCATCTGATTTGCAATTGAAGATGTTTGGTGATCAAAGAAGGGTTGATTTTGTGGCTCATGGGGTTTGGGCTTTGAAATTCTTTAAAGATGAGGACTATAGGAGGTTTGTGAGTGAGTATCAAGATTGTTTGTTTGAGAATGTACACGGTGTCAAAGCTACTGAAGAGAATAAGCTTAAGGTTTATGGGAAAGATTTTATTGGGTGGATAAATCCTGAGGTTGCTGATGATACTATGTGGGAAGCACCTGATGAGGAAGAGGAGTTTAAAAGTCCTGGTTTGACCCCTAGAAAGAACCAGGCCTTGTTAGAGAAGTTTGATGAGGTTGAGGAGGTCGCTAATACCGGAATTCAGAGCTTGGCATTGGGTGCGTTGGATAATAGTTTCCTTGTTGGGAATGATGGTATTCAGGTTGTTAAGAATTTTAGGCATGGGATTCATGGGAAGGGTGTTTGTGTCAAGTTTGATAGGGGGTCCTCTGGTTCAAAGAGCTCGAGTGCTGATTATTCAACCCCAAAGAAGGCGATTTTGATGAGGGGGGAAACGAATATGATGTTAATGAGTCCTTTGATGGAGGGCAAACCTCATGCCTCAGGACTTCACCAGCTTGATATAGAGACTGGGAAGATTGTGACTGAGTGGAAGTTTGAAAAGGACGGGGCTGACATTTCAATGAGGGATATTGCCAATGATACTAAAGGGGCTCAGCTAGAACCCTCAGGGTCCACATTCTTGGGGTTGGACGATAACAGATTATGTCAATGGGATATGAGGGACCGAAGGGGTATGGTTCAGAATCTTGCCTCAGCTAACTCCCCTGTCTTGCATTGGACACAAGGGCATCAGTTCTCGAGAGGGACGAACTTTCAGTGCTTTGCCTCTACTGGGGATGGTTCTATTGTTGTTGGGTCACTTGATGGGAAGATAAGGTTGTATTCTAAGACTTCCATGAGGCAGGCTAAGACAGCATTCCCAGGCCTTGGATCGCCTATCACTCATGTCGATGTTACTTATGATGGGAAATGGATTGTGGGTACGACTGATACATACTTGATTCTCATTTGCGCCTTGTTCACCGACAAGGATGGGAGGACCAAGACTGGATTCAGTGGACGTATGGGGAATAGAATCTCGGCTCCAAGATTGCTCAAGTTAACTCCTCTAGATGCTCACTTGGCTGGTGCAAACAACAAATTCCACCGAGGACAATTCTCATGGGTCACAGAGGAAGGGAAGCAAGAGCGCCACATAGTCGTAACCGCAGGAAAATTCAGCGTGATATGGAACTTCCAGCAGGTGAAGAACAGTGCCCATGAATGCTATAGGAATCAACAAGGGCTGAAGAGCTGCTACTGCTATAAGATTGTGCTGAAGGACGAATCTATTGTTGACAGTCGTTTCATGCACGACAAGTTTGCAGTTAGCGATTCTCCCGAAGCTCCTCTTGTTGTGGCAACTCCGATGAAAGTGACTTCATTCAGCATATCTGGCAAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48772.p1 GENE.R_Transcript_48772~~R_Transcript_48772.p1 ORF type:complete len:654 (+),score=150.23,VID27|PF08553.6|2.5e+02,VID27|PF08553.6|5.4e-51 R_Transcript_48772:537-2498(+)
MGGAQSREGLDLSDSDEYESEEDSQRDEPEEEDYQTSEEQSTPTPSSSSIDDVDSRLKALKLKYSTKTATSNNKQHHSTPPPSNVKNPVKLYLHIGGNTPNAKWVVSDKLTHYSFVKSTPQNGENESDPDEDYEDDEVGKSWFLKIGAKIRARVSSDLQLKMFGDQRRVDFVAHGVWALKFFKDEDYRRFVSEYQDCLFENVHGVKATEENKLKVYGKDFIGWINPEVADDTMWEAPDEEEEFKSPGLTPRKNQALLEKFDEVEEVANTGIQSLALGALDNSFLVGNDGIQVVKNFRHGIHGKGVCVKFDRGSSGSKSSSADYSTPKKAILMRGETNMMLMSPLMEGKPHASGLHQLDIETGKIVTEWKFEKDGADISMRDIANDTKGAQLEPSGSTFLGLDDNRLCQWDMRDRRGMVQNLASANSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIVGTTDTYLILICALFTDKDGRTKTGFSGRMGNRISAPRLLKLTPLDAHLAGANNKFHRGQFSWVTEEGKQERHIVVTAGKFSVIWNFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVDSRFMHDKFAVSDSPEAPLVVATPMKVTSFSISGKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST