Transcript Information: R_Transcript_48798.p1


Annotated TAIR IDAT5G39830.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)DEGP8, DEG8
Annotation TypeOrtholog
Chromosome Positionchr5:15942883-15945676 | Forward length=448
E-Value2.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.36785839939
Replicate 22.2957230523515
Replicate 32.0349949117311
Condition 2: 8 Hour
Replicate 12.6214935137142
Replicate 23.4636445676552
Replicate 34.1761108716608
Condition 3: 24 Hour
Replicate 13.2423326836393
Replicate 22.71294756285
Replicate 33.4402087093301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48798.p1 GENE.R_Transcript_48798~~R_Transcript_48798.p1 ORF type:5prime_partial len:439 (+),score=97.28,Trypsin_2|PF13365.2|1.6e-28,Trypsin|PF00089.22|1.6e-14,PDZ_2|PF13180.2|6e-09 R_Transcript_48798:3-1319(+)
TCTCACTTCAGTTTAGGCATTACTCCGGCGGTGAAGACAGGAATCCGGTCAGGCGTTGTCCCTCTGTCGGCATCACCACCAAGTTCACGAATTCAATTTTGCAGAATTGATTGTTGCGGAAAGGATAATTTGGTTGAATTAGTACGAAGGAACTTCTGTTTTGTAACTGAACGTCGTGCATTGCTTTTGAGTTTAGGGTTTTCTGCTTGTTCTCTTCTTTCTACCAATCTTCCAGCGCATGCATTAGGAGATCCATCTCTGACAATTGAACAAGTAACACCTCAAGTGTTTCCTTCTGGGGCTCTCTTACCTTCGGAGGAAAGAGTTGTACAACTATTTGAGAAGAATACTTACTCTGTTGTCAACATTTTTGATGTGACATTGCGTCCCCAGCTTAATATTACAGGTGCAGTTGAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGATCAAGGGCACATTGTAACAAATTATCATGTGATTGGTAATTCACTTTCGAGAAATCCTAGCCCTGGACAAGTAGTTGCAAGAGTAAATATCTTAGCTTCAGATGGGGTTCAAAAAAGCTTTGAAGGTAGGTTGATTGGAGCTGATCGAGCTAAGGATCTTGCTGTCTTGAAGGTAGAAGCAGCAGAAGACCTTTTGAAGCCCATGAAAGTGGGAGCTTCATCATCCCTTAAAGTTGGTCAACAGTGTTTGGCAATTGGAAATCCTTTTGGATTTGATCACACTCTCACTGTTGGTGTAATAAGTGGATTGAATCGTGATATATTTAGTCAGGCTGGAGTTACAATTGGTGGAGGCATTCAAACAGATGCAGCAATTAATCCTGGAAACAGTGGAGGACCTCTGTTGGATGCTAAGGGTAACTTGATCGGCGTCAATACTGCAATATTTACCCAGACAGGTACATCAGCTGGGGTGGGCTTTGCTATTCCTTCCTCTACTGTTCTGAAGATAATACCTCAATTAATCCAGTTTGGCAAGGTTGTTCGAGCTGGCTTGAACATTGAAATTGCTCCGGACTTGATAGCTAATCAACTAAATGTTCGGAATGGAGCTCTTGTATTACAGGTTCCAGGAAATAGTATGGCTGCCAATGCAGGACTACGTCCAACCACTAGGGGTTTTGCTGGGAATATTGTTTTGGGAGATATCATTGCTGCAGTAGGCAATTTGCCTGTGAGAAACAAAGCTGAGCTGCTGAAGGCATTGGATGACTACACTGTTGGAGATGAGGTAGTCTTGAAGATACAGAGGGGTAATGATAGCTTAGATGTCTCTATTAAACTAGAGGAGGTGAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48798.p1 GENE.R_Transcript_48798~~R_Transcript_48798.p1 ORF type:5prime_partial len:439 (+),score=97.28,Trypsin_2|PF13365.2|1.6e-28,Trypsin|PF00089.22|1.6e-14,PDZ_2|PF13180.2|6e-09 R_Transcript_48798:3-1319(+)
SHFSLGITPAVKTGIRSGVVPLSASPPSSRIQFCRIDCCGKDNLVELVRRNFCFVTERRALLLSLGFSACSLLSTNLPAHALGDPSLTIEQVTPQVFPSGALLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNITGAVEIPEGNGSGVVWDDQGHIVTNYHVIGNSLSRNPSPGQVVARVNILASDGVQKSFEGRLIGADRAKDLAVLKVEAAEDLLKPMKVGASSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDAKGNLIGVNTAIFTQTGTSAGVGFAIPSSTVLKIIPQLIQFGKVVRAGLNIEIAPDLIANQLNVRNGALVLQVPGNSMAANAGLRPTTRGFAGNIVLGDIIAAVGNLPVRNKAELLKALDDYTVGDEVVLKIQRGNDSLDVSIKLEEVSS*

Click here to download the sequence:
Link to NCBI Protein BLAST