Transcript Information: R_Transcript_48800.p1


Annotated TAIR IDAT5G39830.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)DEGP8, DEG8
Annotation TypeOrtholog
Chromosome Positionchr5:15942883-15945676 | Forward length=448
E-Value4.7E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.3089699046971
Replicate 20.14107811887183
Replicate 30.85890901989213
Condition 3: 24 Hour
Replicate 10
Replicate 20.13914989836326
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48800.p1 GENE.R_Transcript_48800~~R_Transcript_48800.p1 ORF type:5prime_partial len:317 (+),score=59.16,Trypsin_2|PF13365.2|7.9e-20 R_Transcript_48800:3-953(+)
TCTCACTTCAGTTTAGGCATTACTCCGGCGGTGAAGACAGGAATCCGGTCAGGCGTTGTCCCTCTGTCGGCATCACCACCAAGTTCACGAATTCAATTTTGCAGAATTGATTGTTGCGGAAAGGATAATTTGGTTGAATTAGTACGAAGGAACTTCTGTTTTGTAACTGAACGTCGTGCATTGCTTTTGAGTTTAGGGTTTTCTGCTTGTTCTCTTCTTTCTACCAATCTTCCAGCGCATGCATTAGGAGATCCATCTCTGACAATTGAACAAGTAACACCTCAAGTGTTTCCTTCTGGGGCTCTCTTACCTTCGGAGGAAAGAGTTGTACAACTATTTGAGAAGAATACTTACTCTGTTGTCAACATTTTTGATGTGACATTGCGTCCCCAGCTTAATATTACAGGTGCAGTTGAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGATCAAGGGCACATTGTAACAAATTATCATGTGATTGGTAATTCACTTTCGAGAAATCCTAGCCCTGGACAAGTAGTTGCAAGAGTAAATATCTTAGCTTCAGATGGGGTTCAAAAAAGCTTTGAAGGTAGGTTGATTGGAGCTGATCGAGCTAAGGATCTTGCTGTCTTGAAGGTAGAAGCAGCAGAAGACCTTTTGAAGCCCATGAAAGTGGGAGCTTCATCATCCCTTAAAGTTGGTCAACAGTGTTTGGCAATTGGAAATCCTTTTGGATTTGATCACACTCTCACTGTTGGTGTAATAAGTGGATTGAATCGTGATATATTTAGTCAGGCTGGAGTTACAATTGGTGGAGGCATTCAAACAGATGCAGCAATTAATCCTGGAAACAGGTACATCAGCTGGGGTGGGCTTTGCTATTCCTTCCTCTACTGTTCTGAAGATAATACCTCAATTAATCCAGTTTGGCAAGGTTGTTCGAGCTGGCTTGAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48800.p1 GENE.R_Transcript_48800~~R_Transcript_48800.p1 ORF type:5prime_partial len:317 (+),score=59.16,Trypsin_2|PF13365.2|7.9e-20 R_Transcript_48800:3-953(+)
SHFSLGITPAVKTGIRSGVVPLSASPPSSRIQFCRIDCCGKDNLVELVRRNFCFVTERRALLLSLGFSACSLLSTNLPAHALGDPSLTIEQVTPQVFPSGALLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNITGAVEIPEGNGSGVVWDDQGHIVTNYHVIGNSLSRNPSPGQVVARVNILASDGVQKSFEGRLIGADRAKDLAVLKVEAAEDLLKPMKVGASSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNRYISWGGLCYSFLYCSEDNTSINPVWQGCSSWLEH*

Click here to download the sequence:
Link to NCBI Protein BLAST