Transcript Information: R_Transcript_48802.p1


Annotated TAIR IDAT5G39830.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)DEGP8, DEG8
Annotation TypeOrtholog
Chromosome Positionchr5:15942883-15945676 | Forward length=448
E-Value8.3E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5147933567073
Replicate 23.5376698732056
Replicate 33.0074491373504
Condition 2: 8 Hour
Replicate 11.8752850616052
Replicate 22.9357831738975
Replicate 32.5023008076245
Condition 3: 24 Hour
Replicate 13.2150977299192
Replicate 22.3165260979162
Replicate 34.5499604928999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48802.p1 GENE.R_Transcript_48802~~R_Transcript_48802.p1 ORF type:5prime_partial len:457 (+),score=105.46,Trypsin_2|PF13365.2|1.7e-28,Trypsin|PF00089.22|1.8e-14,PDZ_2|PF13180.2|6.4e-09 R_Transcript_48802:1-1371(+)
TGGGGTTGCCAAATGCAAGCACTAGTACTCTTATCTGCTTCTCCACCGAGCTGCAACCATGCCAGCAAGTCTCTCAGCCGTCGTGAGCTGTTCGTCGATGGAGTCTCTTCTGTTTACTCTTACTCCTCTAATTCCCCCTCTTCTTCTCGTCCCCAAAGAATTGATTGTTGTGGAAAAGATAATTTGGTTGAATTAGTACGAAGGAACTTCTGTTTTGTAACTGAACGTCGTGCATTGCTTTTGAGTTTAGGGTTTTCTGCTTGTTCTCTTCTTTCTACCAATCTTCCAGCGCATGCATTAGGAGATCCATCTCTGACAATTGAACAAGTAACACCTCAAGTGTTTCCTTCTGGGGCTCTCTTACCTTCGGAGGAAAGAGTTGTACAACTATTTGAGAAGAATACTTACTCTGTTGTCAACATTTTTGATGTGACATTGCGTCCCCAGCTTAATATTACAGGTGCAGTTGAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGATCAAGGGCACATTGTAACAAATTATCATGTGATTGGTAATTCACTTTCGAGAAATCCTAGCCCTGGACAAGTAGTTGCAAGAGTAAATATCTTAGCTTCAGATGGGGTTCAAAAAAGCTTTGAAGGTAGGTTGATTGGAGCTGATCGAGCTAAGGATCTTGCTGTCTTGAAGGTAGAAGCAGCAGAAGACCTTTTGAAGCCCATGAAAGTGGGAGCTTCATCATCCCTTAAAGTTGGTCAACAGTGTTTGGCAATTGGAAATCCTTTTGGATTTGATCACACTCTCACTGTTGGTGTAATAAGTGGATTGAATCGTGATATATTTAGTCAGGCTGGAGTTACAATTGGTGGAGGCATTCAAACAGATGCAGCAATTAATCCTGGAAACAGTGGAGGACCTCTGTTGGATGCTAAGGGTAACTTGATCGGCGTCAATACTGCAATATTTACCCAGACAGGTACATCAGCTGGGGTGGGCTTTGCTATTCCTTCCTCTACTGTTCTGAAGATAATACCTCAATTAATCCAGTTTGGCAAGGTTGTTCGAGCTGGCTTGAACATTGAAATTGCTCCGGACTTGATAGCTAATCAACTAAATGTTCGGAATGGAGCTCTTGTATTACAGGTTCCAGGAAATAGTATGGCTGCCAATGCAGGACTACGTCCAACCACTAGGGGTTTTGCTGGGAATATTGTTTTGGGAGATATCATTGCTGCAGTAGGCAATTTGCCTGTGAGAAACAAAGCTGAGCTGCTGAAGGCATTGGATGACTACACTGTTGGAGATGAGGTAGTCTTGAAGATACAGAGGGGTAATGATAGCTTAGATGTCTCTATTAAACTAGAGGAAGTAAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48802.p1 GENE.R_Transcript_48802~~R_Transcript_48802.p1 ORF type:5prime_partial len:457 (+),score=105.46,Trypsin_2|PF13365.2|1.7e-28,Trypsin|PF00089.22|1.8e-14,PDZ_2|PF13180.2|6.4e-09 R_Transcript_48802:1-1371(+)
WGCQMQALVLLSASPPSCNHASKSLSRRELFVDGVSSVYSYSSNSPSSSRPQRIDCCGKDNLVELVRRNFCFVTERRALLLSLGFSACSLLSTNLPAHALGDPSLTIEQVTPQVFPSGALLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNITGAVEIPEGNGSGVVWDDQGHIVTNYHVIGNSLSRNPSPGQVVARVNILASDGVQKSFEGRLIGADRAKDLAVLKVEAAEDLLKPMKVGASSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDAKGNLIGVNTAIFTQTGTSAGVGFAIPSSTVLKIIPQLIQFGKVVRAGLNIEIAPDLIANQLNVRNGALVLQVPGNSMAANAGLRPTTRGFAGNIVLGDIIAAVGNLPVRNKAELLKALDDYTVGDEVVLKIQRGNDSLDVSIKLEEVSS*

Click here to download the sequence:
Link to NCBI Protein BLAST