Transcript Information: R_Transcript_48824.p1


Annotated TAIR IDAT5G56610.1
Annotated Gene NamePhosphotyrosine protein phosphatases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22916738-22918137 | Forward length=228
E-Value1.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.066989588077
Replicate 29.6201230998311
Replicate 316.326256613985
Condition 2: 8 Hour
Replicate 111.753215174678
Replicate 215.205399652006
Replicate 317.689569622777
Condition 3: 24 Hour
Replicate 112.438957370647
Replicate 29.9449167361149
Replicate 310.744873209931


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48824.p1 GENE.R_Transcript_48824~~R_Transcript_48824.p1 ORF type:complete len:275 (+),score=56.93,DSPc|PF00782.16|3.1e-17 R_Transcript_48824:484-1308(+)
ATGACAATTTCACAAGATGATACTGTTATTGTTGACAAACAAAAGAGTAAAAAGATTGTCAAAATTGATGCAAAGAAGGTGTTAGTTGGAGCAGGAGCTAGGGTCCTCTTTTACCCAACCCTTTTGTACAATGTTCTCAGATTCAAGATTCAATCTGATTTCAGATGGTGGGATGAAGTTGTTCAGTTTCTGTTTCTAGGTGCAGTTCCATTCCCCAAAGATGTTCCAAAGTTAAAGCAACTTGGTGTTGGTGGGGTGATTACTCTTAATGAGCCATTTGAGACATTAGTTCCTCCATCACTATACAAGGCTCATGGAATGGAGCATTTGGTCATCCCAACCAGAGATTACGTGTATGCTCCATCTCTTGTGGATATCAACAGAGCAGTGGATTTCATTCACAATAGTGCGTCTTGTGGGAGGGCAACGTATGTTCATTGCAAAGCTGGGAGGGGAAGGAGCACGACTGTTGCGCTATGCTACCTGGTGAAGCACAAGCAAATGGCACCTTCTGCTGCTATGGATTTGATTCGGTCAAAAAGACCTCGTGTACTGTTGCATTCTATGCAGGCCAATGTTGTGCAGCAATATTATTTGTCCTGTCTGGCTGCATCTGGTTCTTCTACACCAAGCGATGAAGTACTCATAACCAAAGATGATCTTGAAGGATACAATGAGAGTTCTGATCATATTCGCAACAAAGACCTCATCCCAAAAGCAATTAAGGTGCTGCCAGTAGCGAGAAGGCTTTCTTCCCTCGTCAGTTCTTTAGCATTTGCGTGTGGATGTGTATCAATTCCTAGCCAGCAGGTGAAAATGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48824.p1 GENE.R_Transcript_48824~~R_Transcript_48824.p1 ORF type:complete len:275 (+),score=56.93,DSPc|PF00782.16|3.1e-17 R_Transcript_48824:484-1308(+)
MTISQDDTVIVDKQKSKKIVKIDAKKVLVGAGARVLFYPTLLYNVLRFKIQSDFRWWDEVVQFLFLGAVPFPKDVPKLKQLGVGGVITLNEPFETLVPPSLYKAHGMEHLVIPTRDYVYAPSLVDINRAVDFIHNSASCGRATYVHCKAGRGRSTTVALCYLVKHKQMAPSAAMDLIRSKRPRVLLHSMQANVVQQYYLSCLAASGSSTPSDEVLITKDDLEGYNESSDHIRNKDLIPKAIKVLPVARRLSSLVSSLAFACGCVSIPSQQVKMR*

Click here to download the sequence:
Link to NCBI Protein BLAST