Transcript Information: R_Transcript_488273.p1


Annotated TAIR IDAT5G57815.1
Annotated Gene NameCytochrome c oxidase, subunit Vib family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23426753-23427637 | Forward length=78
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27867115961403
Replicate 20.48083130724347
Replicate 30.34972118467408
Condition 2: 8 Hour
Replicate 10.18691499959729
Replicate 20
Replicate 30.13856191313273
Condition 3: 24 Hour
Replicate 10.1752504368527
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_488273.p1 GENE.R_Transcript_488273~~R_Transcript_488273.p1 ORF type:5prime_partial len:131 (+),score=14.43,COX6B|PF02297.13|2.1e-11 R_Transcript_488273:1-393(+)
GAAAGAATGAGTTCTAGATCTTTTTTTGATAGAGCACACATTGATGGAACTGATAACCAATACCTCCAAGAAGGAGAGGTTTATCTCCCACGTATTGGTATCATGAAACCAATCAACAAATACAATCCACGTTTCCCAAATACCAATCAAACCAAGCACTGTTGGTTCGCATACATTGATATGCAATACTGCTACTCCAAGATTGGAAAAGAATTTGCAGAATGTGAATCTCACACCCATCAAGTCAATGCACTTTGCCCTACTCCTTGGATTGAAAAGTGGGATGAACAAATCCAAAATGGAGTCTTTCCAGGTCAAGAATTGATCTTCAAAGAACAATTTCCACTCCATGCATCCAAGCAAGGAATCGTTCCATGGCCAAATCATCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_488273.p1 GENE.R_Transcript_488273~~R_Transcript_488273.p1 ORF type:5prime_partial len:131 (+),score=14.43,COX6B|PF02297.13|2.1e-11 R_Transcript_488273:1-393(+)
ERMSSRSFFDRAHIDGTDNQYLQEGEVYLPRIGIMKPINKYNPRFPNTNQTKHCWFAYIDMQYCYSKIGKEFAECESHTHQVNALCPTPWIEKWDEQIQNGVFPGQELIFKEQFPLHASKQGIVPWPNHH*

Click here to download the sequence:
Link to NCBI Protein BLAST