Transcript Information: R_Transcript_488404.p1


Annotated TAIR IDAT1G12840.1
Annotated Gene Namevacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
Annotated Gene Symbol(s)DET3, ATVHA-C
Annotation TypeHomolog
Chromosome Positionchr1:4375584-4378220 | Forward length=375
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75269942081314
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_488404.p1 GENE.R_Transcript_488404~~R_Transcript_488404.p1 ORF type:3prime_partial len:97 (+),score=21.92,V-ATPase_C|PF03223.11|3e-15 R_Transcript_488404:9-296(+)
ATGTCTGAAAAATTAGAAAGAGAATTTTGGTTTGTCAGTGTACCTGACTCTGCAAGAAACAAATTTGAACAAATTAGACAAAGATTGGAGGGATCCAAACTTGGAACCTGCACTGAATTTCCATTGCCTGATTTGAGAATTGGAACTTTGGATATTCTCGTCAGTCTCAACGATCAATTATCAAAGGATGATTCCTATGTATCAAGTGTAACTTTGAAGATTGCAAAGCAATGGTATGATCTCTACATGGAAGAGTTGGAGGGAGAGAAGAAGGATGTATCATTGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_488404.p1 GENE.R_Transcript_488404~~R_Transcript_488404.p1 ORF type:3prime_partial len:97 (+),score=21.92,V-ATPase_C|PF03223.11|3e-15 R_Transcript_488404:9-296(+)
MSEKLEREFWFVSVPDSARNKFEQIRQRLEGSKLGTCTEFPLPDLRIGTLDILVSLNDQLSKDDSYVSSVTLKIAKQWYDLYMEELEGEKKDVSLD

Click here to download the sequence:
Link to NCBI Protein BLAST