Transcript Information: R_Transcript_48851.p1


Annotated TAIR IDAT4G17140.3
Annotated Gene Namepleckstrin Homology (PH) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9613617-9636618 | Reverse length=4219
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6294045965708
Replicate 22.1745305379365
Replicate 33.2317215526908
Condition 2: 8 Hour
Replicate 13.7193718907208
Replicate 24.3126395817983
Replicate 35.8110219500479
Condition 3: 24 Hour
Replicate 14.871599140148
Replicate 23.6242703907646
Replicate 34.8913604720316


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48851.p1 GENE.R_Transcript_48851~~R_Transcript_48851.p1 ORF type:complete len:4345 (+),score=853.03,VPS13|PF16908.1|1.3e-63,VPS13|PF16908.1|3.8e+02,VPS13|PF16908.1|4.4e+03,VPS13|PF16908.1|3.7e+02,VPS13|PF16908.1|4.8e+03,DUF946|PF06101.7|2.2e-12,DUF946|PF06101.7|4.7e-11,DUF946|PF06101.7|0.4,DUF946|PF06101.7|4.1e-07,VPS13_mid_rpt|PF16910.1|6.4e-32,VPS13_mid_rpt|PF16910.1|1.3e+02,VPS13_mid_rpt|PF16910.1|53,VPS13_mid_rpt|PF16910.1|6.6e+03,Chorein_N|PF12624.3|8.6e-32,Chorein_N|PF12624.3|1.5e+04,SHR-BD|PF06650.8|1.4e-14,PH|PF00169.25|5.9e-09,VPS13_C|PF16909.1|9.9e+03,VPS13_C|PF16909.1|3.1e-05 R_Transcript_48851:208-13242(+)
ATGTTGGAAGACCAGGTAGCGTTCCTGTTGCAGAGGTATTTGGGGAACTATGTCAGAGGTCTCAGTAAAGAAGCTCTCAAAATCAGTGTTTGGAATGGTGATGTGGAGCTAACAAACATGCAACTAAAGCCTGAGGCATTGAATGCTCTAAAGTTGCCAATTAAAGTCAAAGCAGGATTCCTTGGATCAGTCAAGCTTAAGGTTCCCTGGAGCAGGCTTGGCCAAGATCCAGTTTTGGTTTATCTGGATCGAATATTTTTATTGGCTGAGCCTGCAACACAGGTTGAGGGAGGGAGTGAGGATGCTGTACAGGAAGCTAAAAGAAGTCGCATACAGGAGATGGAAATGAAATTGTTGGAAAGAGCACAACGGCTGAAGACGGAAGAAGTGGATAAATCTTGGCTAGGATCTCTAATCAGCACTATAATTGGAAACCTGAAACTTTCAATTTCTAATATCCACATCAGATATGAGGATTTTGAAAGCAATCCAGGCCACCCATTTGCCATTGGTGTAACCTTGAACAAGCTTTCGGCTTTTACTGTTGATGACAATGGTAATGAAACCTTTGCAACTGGGGGAGCACTTGACCATATTCAGAAGTCCGTTGAACTAGAGTGCTTAGCTCTATATTTTGATTCTGATATGTCTCCATGGTATCTTGACAAACCATGGGAGAATTTGCTGCCTTCAGAATGGTCACAGATTTTCAGGTTCGGCACAAAGGACGGTGAAGTGGCAGAAAGTCCTGTACATACACATAGTTACATTCTAGAACCAATATCTGGGAATGCTAAGTACTTGAAGCTGCAGTCGGATGAATCTTTTGTTTATAGCCAGCCTTTGCAGAAGGCAGTGGTAAACTTGGATGAAGTGACAATATGTCTACCAAAGGATGGTTATAGAGATATGCTGAAGTTAGCAGACAATTTTGCTGCCTTTAATCAGCGTCTGAAGTATGCACATTACCGTCCACTTGTATCAGTGAAATCTGATCCTAGGTCGTGGTGGAAGTATGTCTTCAAGGTCATATCGGATCAAATAAAGAAGGCTAGTGGAAAATTATCTTGGGAGCAGGTGCTGAGGTATGCCAAGCTAAGAAAAAAATACATATCTATGTATGCGTTGTTGCTCAAATCCGATCTAAGTCGTGCAGTGGTTGATGACAACAAAGAAATTGAGGAATTAGATCGTGAGCTTGATATTGATCTCATTGTCCAGTGGAGGTTGGTTGCTCACAAGTTTGTGGAGCAGTCTGTAGAATCAGAATTGAGGAAACAAAGGGAAAAGAAGTCATGGTGGTCATTTGGGTGGGGTAGTGATTCATCTCAGCCTGAAGCTGAAACATTACAGTTCAGTGACGAAGACTGGGACCGATTGAATAGGATTATAGGATACAAAGAAGGTGATGATGGAGAGCTTGTTGATGCCAAGAAGGATGTGTTACATACTGCATTTGAGGTCTACATGAGACGTAATGCGTCGAAACTCATTGATGCCCATGAATGTGTAGCCGAATTGTCTTGTGAGCGCCTTGAGTGGTCTGGAAATCTGTATTCAGAGGCAAAAAATTTTGATCTAAAGTTGGGGTCTTATCGCCTATCATCCCCACATGGACTGCTGGCCGAGAGTGCTGATGCTCATGATTCTCTAGTGGGCACTTTTGCGTACAAGCCTTTGGATAAGGATGTCGATTGGAGTTTGGTTGCTAAAGCTTCTCCATGTTACATGACTTATCTCAGAGATTCAATGGACCAGATTCTGAAATTCTTTGAGAGCACTACTGTCAGTCACAGATTAGCTGTGGAGACTGCAGCTACCATACAGATGACTATTGATGAGATGAAACGGACTGCACAAGAGCAAATGTCTAGGGCACTGAAGGATCAAAGCAGGTTTGTGATGGACTTGGATATTGCTGCTCCCAAGATAACAATTCCTACAGAATTTTGTCCAGACAGTAGTCATCCGACAAAACTTATGCTTGACTTGGGGAATTTGATAATACGTACAAAGGATGACCACGGCTCAGAGTCACCTGAGACCATGAATTTGTATCTGCAATTTGATATGGTGCTCAGTGACGTATCTGCTTTTCTAGTGGACGGTGATTACCATTGGAGAAAAGCCTCTTTGAGTGGACGCCCTGGTTCAACCAAGCTATCTCATTTTTTGTTGCCTGTTATAGACAAGTGTGGGGTTGTTCTCAGGCTTCAACAGATAAAGATAGAGAGCCCATTACATCCTTCAACAAGAGTGGCTGTGCGGGTTCCATCATTGGGCTTTCATTTTTCGCCAGCCCGTTACCATCGGCTGATGCAAGTAGTGAAGATATTCGAGCAGGATGATGACAAAAGCTCTGATCCTTTGCGGCCTTGGGATCTAGCTGATTTCGAGGGCTGGCTGTCTCTGCTTACTTGGAAGGGTGTAGGGAACAGGGAGGCTGTGTGGAAGCAAAGATACTTTTGTTTAGTTGGGCCGTTTCTTTATATACTGGAAAACCGAGGCTCCAAAACTTACAAGCAGTATATAAGCTTGCGAGGCAAACTACTGTACAAGGTTCCCCCGGAGATTATTGGCAATGAAAAACATATTCTTGCTATTTGTGATGCTACACAGATTCATGCCCCAAGCAAGGTTGTTGAGCAAGGAAATGCGCTGATTGTTCATTTTGATTCTGAGGACTCTGAAAATGATTGGCACACACGTCTTCAGAGTGCAATCTATCGCGCATCAACTTCGGCTCCTATCACCACTCTGTCTGAATCTTCGTCGGATGCCGATGACTCAGAGACCGAGACTGTTGAGCGCAATGCTGCAGTCAGTGTTACAAATGTGGAGAAAATATTTATAGCTGGTGTTTTAGATGAGTTTAAAATCTGCTTCAGCTATAACCAGCAGTATAATCAGAGTTTTGTGAAGATGCTGCTCGCAGAAGAAAAGCTATTGTTCGAGTTTCGAGCTATAGGTGGTCTGGTTGAAATTGCAATTAAGGAAAATGATATGTTCATAGGAACTGTTCTTAAATCCTTGGAGATTGAAGATTTAGTGTGTGAAGGAACATCTCAGCGCCGTTATTTGGCAAGGTCATTTATCCGGGGCCCAGATATTAGTTTGGTTTCTGAAGATGCAGTGAATAACAGTTGTAGTGGTAATGATTTTTCAAGTGAAGGTGATGATAACTTTTATGAGGCTCCAGAGAGTTTGCCGGATGCTGAATCTCCAATGCAGTCCTCATCGAACTTCTCTTCTGAAGTATCAGCATTTAAGCCTCCTAGCTTTGTCAGAGTTCCTGGTCTTCTCCCTGATAGTTCCTTCCAGTCCACAATAGATAACATGGGGCAGATTGACGAGTTAGATACTTTTGTTAAAGCCCAGATAGTTTTCTATGATCAGAACTCGCCCTACTATAGGAAAACTGATAAGATGGTAGTGGTTACCCTTGCAACCTTGTCTTTTTTCTGTCGTAGGCCTACGATTGCTGCCATAATGGAATTTGTTAATGGTGTTAACCTTGAAGGTGAGAGCCGTGAATCTTTCAGTGATAGCTCATCAATGGCAACTCCACAGCATGATGTATCTGGTGAAGATGTTGATCCACAAAGTACTGGAGCACAGCCTGTTGTCAAAGGTTTATTAGGAAAGGGAAAGTCCAGAGTAATGTTTTATCTAGTTCTGAATATGGCACGTGCTCAAATAGTTCTTATGAAGGAGGATGAAACTAAGCTTGCCAGCTTGTTACAAGATAATTTGCTTACTGATATTAAGGTGTTTCCTTCTTCATTTAGTATCAAAGCTGCGATTGGTAATCTCAGAATAAGTGATGACAGTCTTTCTCCTAATCACAGTTATTTCTGGGCCTGTGATATGAGGAATCCAGGAGGCAGCTCATTTGTTGAGGTGCATTTTTCTTCATACAATCTTGATGATGATGACTATGAAGGCTATGAATATAGCCTCTCTGGACAGCTTTCAGAAGTAAGAATTGTGTTCTTGAATCGCTTTATTCAGGAGGTGGTTAGTTACTTAACTGGTCTTGCTCCCAGCACATCAAATAGTGTTGTGAAATTGAGAGATCAGGTCACTGACGCTGAGAAGTGGTTTACTACCAGTGAAATAGAGGGTTCACCTGCTGTCAAGTTGGATTTGTCACTTACAAAGCCAATAATTATTATGCCGCGGAGAACAGATAGTCTTGATTACCTGGAACTTGATGTTGTACATATAACTGTACAAAACACCTTCCATTGGTTAAATGGCAGTAAACATGAAATGAATGCTGTTCACATGGAGATACTGACTGTGCTGGTTGAAGATATAAATTTGAATGTTGGAACTGGAAAGCGACTGGGTGATAGCATAATTCAGGAAGTCAATGGCTTATCCATTGTCATCCGGCGTTCCCTTCGGGATTTGTTACATCAAACTCCAGACACAGAAGCAAAAGTAGAGATGAAAGTACTGAAAGCTGCTTTAACTAATCGAGAGTACAAGATCATTACAGAATGTGCATTATCTAATATCTCTGAGACACCAAACATTGTGCCTCCTCTGAAGGGGGATAAAACAACCCCCTCTGGTGACATATCTGTACCAGTTGCTTCTTCAGACTTGGGTCTTACTGGAGCTGATACTAATACCAGGGAGGTGTGGATCAGCATGAAAGTCATTGTTGCTATTAATTTAGTTGAATTATCTCTACATAGAGGTGCAGCAAGGGATTCGCCATTGGCAACTGTGCAGGTCAACAGTGCATGGCTTCTCTATAAGTCCACTACAGCCGGAGATGGGTTTGTATCCGTCACACTTCGGAGCTTCAATGTCCTTGATGATCGTGAGAGTACTCAGGAGCAGTTCAGATTGGCAATTGGGCAACCAAAGAGCATTAAGTATAGTCCATCACATCTTCAGAATGATGAAGATCAGCAAGTGGTCAACTCCAATGTTGCAAAAGAACCTGAGACTACTGTGGTTGCTACCATGCTTATATTTGATGCTAAGTTCAGTGAGCAGTCATCATCCATTTGTTTGTGTGTACAGAGGCCCCAATTGCTTGTTGCACTTGATTTTCTCCTCGCCGTGATTGAGTTCTTTGTTCCTTCTGTTCGTGGCATGCTCTCAAGTGAAGAGGATGACATTTCAATGAATTTGGTTGATGCAATTATTTTGAATGAGTCTACCTACACCCAACCCACAACCGAATTTTCTATTTCTCCTCAAAGACCTTTGGTTGTAGATGGTGAGAAATTTGATCATTTTATCTATGATGGACAAGGTGGAAGGTTGTTGCTAAAAGACAGAAATGGTTCTAATATTTCCTCTCCCAGTACAGAAGCTATAATATATGTGGGAAGTGGGAAAAGATTGCAATTCAAAAATGTTCATATCAAGGATGGGCGGTTTTTGGACTCCTGTATAGTGTTAGGAGCAAATAGTAGTTACTCTTTTTCAGAGGATGATCAAGTTGTCTTGGAGGGCGGAGATGATGATCCCTTGCTAGACTCATCTGGCAACAATGAAGTCATAGAGCATCAAAATATTGAAAATGACAAATCCTCTGAATACATCATTGAGTTTCAGGCTATCAGTCCAGAGCTTACATTTTACAACACATCAAAAAATGTTGGCGAGTCACTAATTCTGTCCAACAAACTGTTGCATGCTCAGCTAGATGCATTCTGCAGGATTGTTTTGAGGGGTGAAACCATGGAGATGACTGCAAATGCACTGGGATTGACAATGGAGAGCAATGGAATAAGAATTTTGGAGCCCTTTGATGCCTGTATCAAGTTCTCAAAAGTTGCTGGGAAAACAAACATACATCTGTCTGCATCTGATATATATATGAATTTTTCCTTTAGTATCTTGCGTCTTTTTTTGGCTGTCGAAGAAGACATGATGGCCTTCTTAAGGATGACATCAAGGAAAATGACCATAAGCTGTTCAGAGTTTGACAAAGTTGCAATGATTGAATACCCCAACAGTGACCAAGTATATGCTTTTTGGAGACCTCGTGCACCACCTGGTTTTGCTGTCCTCGGCGACTATTTGACACCAATTGATAAGCCACCTACCAAGGCTGTTCTTGCTGTGAATATGAACCTTGTGAAGATTAAGAAACCTGAGTCTTTCAAGTTAATCTGGCCACCTATTGCATCATTTGATGTCTCTGACTCAGAAGGCAGCGGTAGGGTACCACATATCAGTCAGAGGAATGTAAGCTGTTCAATTTGGTATCCTGTGGCACCAAAAGGTTATATTGCACTGGGCTGTGTGGTTTCATCTGGGACAACACCTCCACCTCTATCGTCTTCATTCTGCATCTTGGCTTCTCTTGTTTCCTCTTGTCCTATGAGGGATTGCATTATCATTGGAGCTAGCAATGAACACTCATCTGCTATGGCCTTCTGGCGCGTGGACAATTGTGTTGGCACTTTTTTGCCAACTGATCCTTCCTCAATGAACCTGATAGGTGGAGCATATGACCTGCGTCATATCTTTTTTGGGGCATCAGAGTCTTCACAAGATGTATCTAGTAGGTCCCGCAGTCCAGTGCCTTCTAGTCGTGAACACTATACAGCACAGTCAGCATTTGCAAATTCTGGTCGTCGCTTGGAGGCTGTGGCCAGCTTCCGTTTGGTGTGGTGGAATCAAGGTTCAACCTCTAGAAAGAAATTGTCAATTTGGCGTCCGGTTGTCCCTCACAGGATGGTATATTTTGGTGATATTGCTGTGAAAGGGTATGAACCTCCGAATGCCTGTGTTGTTGTTGAGGATGTGGGAGATGAACTTTTCAAAGAACCTGTAGACTTCCAAATGGTAGGGAAGATCAAGAAGCACAGGGGAATAGAGCCTGTTTCCTTCTGGTTGCCTCAAGCTCCACCAGGTTACGTTCCTTTGGGCTGTATTGCCTGTAAAGGATCTCCAAAAAAAGATGTTAGCTCATTACGATGCATACGCAGTGACATGGTCACTGGGGATCAGTTTTCTGAAGAAAGTGTGTGGGATACATATGATGCTGGGCTTAGGACAGAGCCCTTTAGCATATGGACAGTTGGTGGCGAGCTGGGAACCTTTCTTATCAGAAGTGGTCACAAGAAGCCTCCTAAAAGATTCGCAGTGAAGCTGGCAGATAAAAGTGTAACAGGTGGTCCAGAGGATACCGTCATCGATGCAGAAATTAGAACATTCTCTGCAGCATGCTTTGATGATTTTGGTGGCTTGATGGTTCCATTGTTTAATGTGTCCCTGAGTGGCATAGGCTTCAGTATGCATGGAAGACCTGACTACTTAAATTCTACTGTCAACTTCTCGTTTGCAGCAAGGTCATACAATGACAAGTATGAGTCTTGGGAACCTGTTGTGGAACCAGTTGACGTATTTTTGAGGTACCAATATGACTTAAATTCTCCTGGTGCTGCTTCTCAGTTACGTCTCACTTCAACAAAAGATCTAAATTTGAATGTTTCGAGTTCTAATGCTAATATGATTCTTCAAGCTTATGCAAGCTGGAACAATCTTACTCAAGTTCATGAGTCTCATGTCAGAATAGAAGCTATATCTCCAACTCATAAGGATAGCTGCATTGATGATATACATCACAAAAAAAATTATTACATTATCCCCCGAAACAAGCTTGGTCGGGATATTTTCATCAGGGCCACTGAGGTCAGGGGGCTTTCAAGAGTGATTAGGATGCCATCAGGGGATATGAAGCCTCTCAAAGTTCCTGTATCCAAAAACGTGCTGGACTCTCACATAAGAGGCAGTGTTCACCAGAAAATTCATGCAATGTTGTCACTGATAATCACAGAAGCACAGTTCCCAAGTTTGCGGGGGCTATCTTCTCGACAGTATGCCGTGGCAATACGCCTTATTCAAGAACCTATGTCAGCTGATGAAACATTATTGAATCAACAAAGTGCACGTACATGTGGTTGCAGCTCGGAGTTTTCTAGTTCTTTGGAGCTTGAATGCGTAAAATGGAATGAGGTGTTCTTCTTTAAAGTTGATTCTCTGGACAGCTACAGGGTGGAGCTCATTGTGACGGACATTGGAAAAGGTGATCCAGTTGGATTTTTCTCAGCCCCTTTAAAGCATATTGTAGCTTTGGAAGGTGCACATTCCCATTATTCTGTTATGAGGTGGAACTGGATTGACTTGTCTCCACCAGAGTTAAAGATGGTGTCTGATGGAGAGACTTCTAAGGGGTCACAAGGAAGATTAAAGCTTGCTGTTATTCTGTCGTCAAAACTGCAAGTTGGAGAAAGTAAGCAGTCCTCTGGCCACAGTAAAAAGAACGGATTTATCCAGATTAGCCCTACCAGGGAAGGGCCTTGGACAGCAGTTAGGTTGAATTATGCTGCTCCTGCTGCTTGTTGGAGACTAGGCAGTGATGTTGTTGCCAGTGAAGTTAGTGTGCATGATGGCAACAGATATGTTAACATAAGATCTCTCGTTTCAGTGCGTAATGAGACTGACTTTATGCTTGATTTGTGCCTAAAAGCCAAGGCCTTATCTGACCCGAAGAGGCTGCTGGATGATGCAGAGACATCTGAGAAAGCAAAAACCTGTGATGGAAGGACTGAAACAGTGGAATTTTTTGAAATTGAAAAGTATATACCAGATGCTGGTTGGGTGTGCTGTTCGGGAAAGCCTAGTAATGGTCAATCAGCTAGTGTGATGCCCAACAAGGATGTTGCCGGTGTAGAATCACCCACTGGGTGGGAGTGGGTTGATGAGTGGCACTTAGATGAAGCACGTAAGGATAGTGTTGATGGATGGGTTTATGCTCCAGATCAAAAGAGTCTTGAGTGGCCAAAGGCGTATGATGCTGGACATAATGCGAATCATGTGAGGCAGCGCAGATGGATTCGGAACAGGAAACAAATTTCAAGTGATGCTGGCCAACAAGTATCTATTGGGCTATTAAAGCCTGGAGACTCTGTTCCCCTTCCTCTTTCTTGTTTAACACAAGTTGGGGCATATGTTTTGCAGCTTCGGCCTTTAAATTTTGGCATGCCCGATGAATATGCTTGGAGTAAAGTGGTTGATAAGCCTGTTGAATTACAGGGTTCTGGCAAACCTCAAGAAGGATCTGAGATATGTGTATCAGATCTCGAGGAGTCTGAGAAACTGTTGTACTGTCCGCAGATTGTTGGAACCTCTTCCAGTGATTCCCATGGAATTTGGTTCTGTCTGAACGTGCAGGCTATGGAGATTGCAAAGGATGTTCGTTCAGATCCCATTCAGGATTGGAGTCTTGTTGTTAAGTCCCCATTATCTATTATTAATTATCTTCCCTTGAGAGTCGAGTATTCAGTTCTGGAATTGCAATCCAGTGGTAACTTGGTTGCTCGTTCTCGTGGTATCTTTTCTCCTGGAAAAACTGTAAATGTTTATTCTGCTGATATTACAAATGCTTTATTTTTGTCGCTGCTTCCACAGAAAGGATGGGTGCCAATGCATGAAGCTGTTCCGATATCTCGGCCAAGTGGCATGCCATCAAGAACTCTAAATTTAAGAAGCGCACTTTCTGGAAGGACAGTTGAAGTTGTTCTGGAGCATAATCATGAGAAAGAGCAAGCTGTCATGCCCAAGGCTGTCAGAATCTATGCCCCGTATTGGTTTTCTGTTTCCAGGTGTCCCCCTCTTACATTTAGGCTTGTTGATATGGATCACAGAAAGGCGGAAAAGGTTTCTCTAACACTGAAGTCCAAAAAAAGCAATCTAGAAATAAGTGGGCAAATAACAGAAGATGAATTCCATGAAGGTTATACACTTGCTTCTTCATTGAACTTCAAATCAGTGGGACTACAAGCATCCATTTCTCAATCCGGAGAAAACATGTTTGGGCCCGTGAAAGATCTTTCTCCACTTGGCGACTTGGATGGATCATTGGATCTGGCAGCTTATGATGCTGCTGGAAATTGTATCCGTCTTTTCATCACCTCAAAGCCATGCCCCTATCAATCCATTCCTACAAAGGTAATCTCCATCAGGCCATACATGACTTTCACCAACAGACTAGGTCAAGACATTTTTATTAAGTTAAGCACTAGAGATGAGCCAAAGGTCTTACGGGCCTCAGATTCAAGATTGTGCTTTATGTACCAAGAAACTGCAGAATCTGACAAACTCCAGGTTCGCTTAGTGGATACGAAATGGTCTTTTCCTGTTGAGATTGTGAAGGAAGACAGTTTCTCTCTGGTTTTGAGAAAGGAAAATGGTGAACGGTTATTTCTGAGGACAGAAGTACGGGGCTATGAGGAGGGATCACGTTTCATTGTTGTTTTCCGTCTAGGCTCAACAGTTGGTCCCATCAGGATTGAGAATCGAACAAGTAGCAAGACCATTAGCATTTGCCAATCTGGAATCGATGAAGATCATTGGATCCATCTGACACCCTTATCCACAACAAGCTTTTCTTGGGATGATCCATATGGTCAGAAATGTTTGGATGTCTGTGTTCGCAATGGCAGTAGCATAGTCTCTTCAAAGCTCAATTTGGAAACTACTCCTATGTGTTCACTAGTAGGGGGAACAGGTGTGCTGTTTCATATGGTGGATAGTGGAGATGTCAAGGTTGCTCGATTCACAGAGGAGCTATCATCGAGTTTAAGTTCACAAGATGAACAATTGTTGATAGGTGGGACTTTGGGGAGTTTTCACTTGCAGAGGAAAGTGGAGAATACTGCTTCACCATTAGAGCTTACGATTGAATTGGGGGTACTTGGTCTTTCAGTCGTAGACCATAGACCAAGAGAGCTTTTGTATTTATACTTGGACAGAGTCTATGTAGCATATTCCACTGGTTATGATGGTGGGACTACAAGCAGGTTCAAGCTCATATTGGGCCATCTGCAGCTTGACAATCAGCTACCCCTGACAGCAATGCCTGTACTACTAGCACCTGAGCAACCTGATTCACCGCAGCCAGTATTCAAAATGACAATTACCATGCGAAATGAAAACACTGATGGTGTTCAGGTTTATCCTTATGTTTATATAAGGGTGGCTGAAAAGGGCTGGAGGATAAATATTCATGAGCCTATTATTTGGGCATTAATGGATTTCTACAATAAACTTCAGCTAGATCGCCTTCCGCAAAGCCAGAATGTCACACAAGTTGATCCAGAGATACGCATAGATCTTATTGATGTGTCAGAAGTAAGATTGAAAGTCTCACTTGAAACAGCACCTGCTCAAAGACCACATGGAGTACTTGGAGTTTGGAGCCCCATATTATCAGCCATTGGAAGTGCATTCAAAATTCAGATCCACCTAAGGAAAGTTATTCACAAGGACAGATTTATGCGAAGAAGCTCTGTACTTCCTGCCATTACAAACCGTATTTGGCGGGACTTGATACACAACCCATTACATATAATATTCTCAGTTGATGTTCTTGGTATGACAAGATCTACCTTAGCTTCACTTAGCAAAGGGTTCGCAGAGCTCTCTACAGATGGCCAATTTTTGCAATTACGTTCAAAGCAGGTACGTTCCAGAAGAATTACAGGAGTAGGTGATGGAATTATTAAAGGAACAGAAGCTCTGGCACAAGGTGTTGCTTTTGGTGTGTCTGGAGTAGTCAGAAAGCCTGTAGAGAGTGCCAGAGAAAATGGTGTTTTGGGACTTGCCCATGGGCTTGGACGAGCTTTTGTAGGATTCATAGTCCAACCCGTGAGTGGAGCACTTGATTTTCTCTCCTTGACTGTTGACGGGATTGGAGCAAGTTGTGCTAGGTGTTTTGAAGTTTTAAACAGTAGATCCATACTCCAAAGAGTTAGAAATCCTCGAGCTATATGCACAGATGGGATTCTTCGAGAGTATAACGAGAGAGAAGCTGTTGGACAGATGATACTTAATCTGGCAGAAGCAAGTCATCACTTGGGCTGCACTAGTATCTTCAAAGAACCTTCCAAATTTGCATGGTCTGACTATTATGAAGATCATTTCGTATTGTCTCCATCAAGAATTGTATTGGTTACCAACAAAAGGGTTATGCTACTCCAGTGTAAAGCTCTGGAGAATATGGATAAGAAACCTAGCAAAATTTTGTGGGATGTGCCTTGGGAAGAGCTGCTGGCACTTGAGTTAGCCAAAGCGGGAAGACGTCAACCTTCTAATTTGATTCTTCATCTAAAAAATTTTAAGCGGTCTGAGGCATTTGCTCGGGTCATCAAATGCAAACCTGAGGACCAGTCTGAAGGTGGGGCCCTCCAACTGCAAGCAGTCAAAATCTGCTCAGCAGTGCGCAAGATGTGGAAAGCATATCAATCTGACATAAAAATCTTGACTTTAAAGGTACCTTCTAGCCAACGATTTGTGCACTTCTCCTGGAGTGAAGCTGATGGGAGAGATTTGCATAACCAAAATAAATCAATTGTTATGTCAAGAGAAGTGTCTTCATCTGGTTCTGTGTCAGATGAAAGGAGGTTTGTGGAGCATATCATCAACTTTTCCAAAATCTGGAGTAGTGAACAAGAATCTAAAGGCAGATGCCCATTGTGTAGAAAGAAGGGTACGGAAGATTGCCACATTTGTAGCATCTGGAGACCAACTTGTCCCTCTGGGTATGTGTCGGTGGGGGATGTAGCGCATGTTGGTGGCCACCCTCCAAATGTTTCGGCGGTTTATTACTACAGTGAACAGAACTTTGCTCTTCCAGTGGGATTTGATCTGGTATGGAGGAACTGTGAAGATGACTACATCATTCCTGTATCTATATGGCTTCCACGGGCTCCGGATGGTTTTGTTGCTCTAGGATGCGTTGCTGTAGATGGATTCAAAGAGCCTGAACTGAATACAGTGTATTGTGTGGCGGAATCATTGGTTGAGGAGGCAGAATATGAGGCGCAAAAGATATGGTCTGCTCCAAATTCATATCCATGGGCATGCCATATTTATCAGGTCCAGAGTGGTGCTCTTCATTTTGTAGCTCTGAGACAACCTCGGGAAGAGTCTGAATGGAAGCCAAAGCGCGTGCGGGAGAGTCTCGAGTCCTCATCATGCTCACCGGAGTCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48851.p1 GENE.R_Transcript_48851~~R_Transcript_48851.p1 ORF type:complete len:4345 (+),score=853.03,VPS13|PF16908.1|1.3e-63,VPS13|PF16908.1|3.8e+02,VPS13|PF16908.1|4.4e+03,VPS13|PF16908.1|3.7e+02,VPS13|PF16908.1|4.8e+03,DUF946|PF06101.7|2.2e-12,DUF946|PF06101.7|4.7e-11,DUF946|PF06101.7|0.4,DUF946|PF06101.7|4.1e-07,VPS13_mid_rpt|PF16910.1|6.4e-32,VPS13_mid_rpt|PF16910.1|1.3e+02,VPS13_mid_rpt|PF16910.1|53,VPS13_mid_rpt|PF16910.1|6.6e+03,Chorein_N|PF12624.3|8.6e-32,Chorein_N|PF12624.3|1.5e+04,SHR-BD|PF06650.8|1.4e-14,PH|PF00169.25|5.9e-09,VPS13_C|PF16909.1|9.9e+03,VPS13_C|PF16909.1|3.1e-05 R_Transcript_48851:208-13242(+)
MLEDQVAFLLQRYLGNYVRGLSKEALKISVWNGDVELTNMQLKPEALNALKLPIKVKAGFLGSVKLKVPWSRLGQDPVLVYLDRIFLLAEPATQVEGGSEDAVQEAKRSRIQEMEMKLLERAQRLKTEEVDKSWLGSLISTIIGNLKLSISNIHIRYEDFESNPGHPFAIGVTLNKLSAFTVDDNGNETFATGGALDHIQKSVELECLALYFDSDMSPWYLDKPWENLLPSEWSQIFRFGTKDGEVAESPVHTHSYILEPISGNAKYLKLQSDESFVYSQPLQKAVVNLDEVTICLPKDGYRDMLKLADNFAAFNQRLKYAHYRPLVSVKSDPRSWWKYVFKVISDQIKKASGKLSWEQVLRYAKLRKKYISMYALLLKSDLSRAVVDDNKEIEELDRELDIDLIVQWRLVAHKFVEQSVESELRKQREKKSWWSFGWGSDSSQPEAETLQFSDEDWDRLNRIIGYKEGDDGELVDAKKDVLHTAFEVYMRRNASKLIDAHECVAELSCERLEWSGNLYSEAKNFDLKLGSYRLSSPHGLLAESADAHDSLVGTFAYKPLDKDVDWSLVAKASPCYMTYLRDSMDQILKFFESTTVSHRLAVETAATIQMTIDEMKRTAQEQMSRALKDQSRFVMDLDIAAPKITIPTEFCPDSSHPTKLMLDLGNLIIRTKDDHGSESPETMNLYLQFDMVLSDVSAFLVDGDYHWRKASLSGRPGSTKLSHFLLPVIDKCGVVLRLQQIKIESPLHPSTRVAVRVPSLGFHFSPARYHRLMQVVKIFEQDDDKSSDPLRPWDLADFEGWLSLLTWKGVGNREAVWKQRYFCLVGPFLYILENRGSKTYKQYISLRGKLLYKVPPEIIGNEKHILAICDATQIHAPSKVVEQGNALIVHFDSEDSENDWHTRLQSAIYRASTSAPITTLSESSSDADDSETETVERNAAVSVTNVEKIFIAGVLDEFKICFSYNQQYNQSFVKMLLAEEKLLFEFRAIGGLVEIAIKENDMFIGTVLKSLEIEDLVCEGTSQRRYLARSFIRGPDISLVSEDAVNNSCSGNDFSSEGDDNFYEAPESLPDAESPMQSSSNFSSEVSAFKPPSFVRVPGLLPDSSFQSTIDNMGQIDELDTFVKAQIVFYDQNSPYYRKTDKMVVVTLATLSFFCRRPTIAAIMEFVNGVNLEGESRESFSDSSSMATPQHDVSGEDVDPQSTGAQPVVKGLLGKGKSRVMFYLVLNMARAQIVLMKEDETKLASLLQDNLLTDIKVFPSSFSIKAAIGNLRISDDSLSPNHSYFWACDMRNPGGSSFVEVHFSSYNLDDDDYEGYEYSLSGQLSEVRIVFLNRFIQEVVSYLTGLAPSTSNSVVKLRDQVTDAEKWFTTSEIEGSPAVKLDLSLTKPIIIMPRRTDSLDYLELDVVHITVQNTFHWLNGSKHEMNAVHMEILTVLVEDINLNVGTGKRLGDSIIQEVNGLSIVIRRSLRDLLHQTPDTEAKVEMKVLKAALTNREYKIITECALSNISETPNIVPPLKGDKTTPSGDISVPVASSDLGLTGADTNTREVWISMKVIVAINLVELSLHRGAARDSPLATVQVNSAWLLYKSTTAGDGFVSVTLRSFNVLDDRESTQEQFRLAIGQPKSIKYSPSHLQNDEDQQVVNSNVAKEPETTVVATMLIFDAKFSEQSSSICLCVQRPQLLVALDFLLAVIEFFVPSVRGMLSSEEDDISMNLVDAIILNESTYTQPTTEFSISPQRPLVVDGEKFDHFIYDGQGGRLLLKDRNGSNISSPSTEAIIYVGSGKRLQFKNVHIKDGRFLDSCIVLGANSSYSFSEDDQVVLEGGDDDPLLDSSGNNEVIEHQNIENDKSSEYIIEFQAISPELTFYNTSKNVGESLILSNKLLHAQLDAFCRIVLRGETMEMTANALGLTMESNGIRILEPFDACIKFSKVAGKTNIHLSASDIYMNFSFSILRLFLAVEEDMMAFLRMTSRKMTISCSEFDKVAMIEYPNSDQVYAFWRPRAPPGFAVLGDYLTPIDKPPTKAVLAVNMNLVKIKKPESFKLIWPPIASFDVSDSEGSGRVPHISQRNVSCSIWYPVAPKGYIALGCVVSSGTTPPPLSSSFCILASLVSSCPMRDCIIIGASNEHSSAMAFWRVDNCVGTFLPTDPSSMNLIGGAYDLRHIFFGASESSQDVSSRSRSPVPSSREHYTAQSAFANSGRRLEAVASFRLVWWNQGSTSRKKLSIWRPVVPHRMVYFGDIAVKGYEPPNACVVVEDVGDELFKEPVDFQMVGKIKKHRGIEPVSFWLPQAPPGYVPLGCIACKGSPKKDVSSLRCIRSDMVTGDQFSEESVWDTYDAGLRTEPFSIWTVGGELGTFLIRSGHKKPPKRFAVKLADKSVTGGPEDTVIDAEIRTFSAACFDDFGGLMVPLFNVSLSGIGFSMHGRPDYLNSTVNFSFAARSYNDKYESWEPVVEPVDVFLRYQYDLNSPGAASQLRLTSTKDLNLNVSSSNANMILQAYASWNNLTQVHESHVRIEAISPTHKDSCIDDIHHKKNYYIIPRNKLGRDIFIRATEVRGLSRVIRMPSGDMKPLKVPVSKNVLDSHIRGSVHQKIHAMLSLIITEAQFPSLRGLSSRQYAVAIRLIQEPMSADETLLNQQSARTCGCSSEFSSSLELECVKWNEVFFFKVDSLDSYRVELIVTDIGKGDPVGFFSAPLKHIVALEGAHSHYSVMRWNWIDLSPPELKMVSDGETSKGSQGRLKLAVILSSKLQVGESKQSSGHSKKNGFIQISPTREGPWTAVRLNYAAPAACWRLGSDVVASEVSVHDGNRYVNIRSLVSVRNETDFMLDLCLKAKALSDPKRLLDDAETSEKAKTCDGRTETVEFFEIEKYIPDAGWVCCSGKPSNGQSASVMPNKDVAGVESPTGWEWVDEWHLDEARKDSVDGWVYAPDQKSLEWPKAYDAGHNANHVRQRRWIRNRKQISSDAGQQVSIGLLKPGDSVPLPLSCLTQVGAYVLQLRPLNFGMPDEYAWSKVVDKPVELQGSGKPQEGSEICVSDLEESEKLLYCPQIVGTSSSDSHGIWFCLNVQAMEIAKDVRSDPIQDWSLVVKSPLSIINYLPLRVEYSVLELQSSGNLVARSRGIFSPGKTVNVYSADITNALFLSLLPQKGWVPMHEAVPISRPSGMPSRTLNLRSALSGRTVEVVLEHNHEKEQAVMPKAVRIYAPYWFSVSRCPPLTFRLVDMDHRKAEKVSLTLKSKKSNLEISGQITEDEFHEGYTLASSLNFKSVGLQASISQSGENMFGPVKDLSPLGDLDGSLDLAAYDAAGNCIRLFITSKPCPYQSIPTKVISIRPYMTFTNRLGQDIFIKLSTRDEPKVLRASDSRLCFMYQETAESDKLQVRLVDTKWSFPVEIVKEDSFSLVLRKENGERLFLRTEVRGYEEGSRFIVVFRLGSTVGPIRIENRTSSKTISICQSGIDEDHWIHLTPLSTTSFSWDDPYGQKCLDVCVRNGSSIVSSKLNLETTPMCSLVGGTGVLFHMVDSGDVKVARFTEELSSSLSSQDEQLLIGGTLGSFHLQRKVENTASPLELTIELGVLGLSVVDHRPRELLYLYLDRVYVAYSTGYDGGTTSRFKLILGHLQLDNQLPLTAMPVLLAPEQPDSPQPVFKMTITMRNENTDGVQVYPYVYIRVAEKGWRINIHEPIIWALMDFYNKLQLDRLPQSQNVTQVDPEIRIDLIDVSEVRLKVSLETAPAQRPHGVLGVWSPILSAIGSAFKIQIHLRKVIHKDRFMRRSSVLPAITNRIWRDLIHNPLHIIFSVDVLGMTRSTLASLSKGFAELSTDGQFLQLRSKQVRSRRITGVGDGIIKGTEALAQGVAFGVSGVVRKPVESARENGVLGLAHGLGRAFVGFIVQPVSGALDFLSLTVDGIGASCARCFEVLNSRSILQRVRNPRAICTDGILREYNEREAVGQMILNLAEASHHLGCTSIFKEPSKFAWSDYYEDHFVLSPSRIVLVTNKRVMLLQCKALENMDKKPSKILWDVPWEELLALELAKAGRRQPSNLILHLKNFKRSEAFARVIKCKPEDQSEGGALQLQAVKICSAVRKMWKAYQSDIKILTLKVPSSQRFVHFSWSEADGRDLHNQNKSIVMSREVSSSGSVSDERRFVEHIINFSKIWSSEQESKGRCPLCRKKGTEDCHICSIWRPTCPSGYVSVGDVAHVGGHPPNVSAVYYYSEQNFALPVGFDLVWRNCEDDYIIPVSIWLPRAPDGFVALGCVAVDGFKEPELNTVYCVAESLVEEAEYEAQKIWSAPNSYPWACHIYQVQSGALHFVALRQPREESEWKPKRVRESLESSSCSPESQ*

Click here to download the sequence:
Link to NCBI Protein BLAST