Transcript Information: R_Transcript_488982.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeOrtholog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value2E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11929716145624
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.38115139502021
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.12531397096919
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_488982.p1 GENE.R_Transcript_488982~~R_Transcript_488982.p1 ORF type:internal len:176 (+),score=16.26,Chloroa_b-bind|PF00504.17|1.3e-41 R_Transcript_488982:1-525(+)
GCTGGGGACATCATTGGGACCAGGACCGAGCTCGCGGACGTGAAGTCCACGCCGTTCCAGCCCTACAGCGAGGTGTTCGGGCTGCAGAGGTTCCGCGAGTGCGAGCTCATTCACGGGAGGTGGGCCATGCTCGCCACTCTCGGAGCTCTCACTGTTGAGTGGCTCACTGGTGTTACATGGCAAGACGCCGGAAAGGTGGAGCTAGTGGAAGGTTCATCATACCTAGGGCAACCACTTCCATTCTCAATCACCACACTGATCTGGATCGAGGTACTCGTAATTGGCTACATAGAGTTCCAGAGGAATGCAGAGCTCGACCCAGAGAAGAGGTTGTACCCAGGTGGCAGTTACTTCGACCCATTGGGCCTGGCCTCAGACCCAGAGAAGAAAGCCACCCTTCAATTGGCGGAGATCAAGCACGCCCGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCCGCCACTGGCAAGGGCCCGCTCAACAACTGGGCCACCCACTTGAGTGACCCACTTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_488982.p1 GENE.R_Transcript_488982~~R_Transcript_488982.p1 ORF type:internal len:176 (+),score=16.26,Chloroa_b-bind|PF00504.17|1.3e-41 R_Transcript_488982:1-525(+)
AGDIIGTRTELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLH

Click here to download the sequence:
Link to NCBI Protein BLAST