Transcript Information: R_Transcript_488996.p1


Annotated TAIR IDAT3G02260.1
Annotated Gene Nameauxin transport protein (BIG)
Annotated Gene Symbol(s)BIG, DOC1, TIR3, UMB1, ASA1, LPR1, CRM1
Annotation TypeHomolog
Chromosome Positionchr3:431152-448489 | Reverse length=5098
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7186205100283
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17234413139289


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_488996.p1 GENE.R_Transcript_488996~~R_Transcript_488996.p1 ORF type:internal len:127 (+),score=5.52,zf-UBR|PF02207.16|3.3e-06,zf-UBR|PF02207.16|6.1e+02 R_Transcript_488996:1-378(+)
GTTCAATTGCCGCTCAAAGTTTGCACATTTCAATATTCGGGTAAAAATTATTCGGAGCAAATTTGGTATTATTGTAAAACATGTTTCAAAGAACAGATGAAAGGAGTTTGTGCAATATGTTCAGTTCATTGTCATCATGGACATGATCTTCGATTTGGAGGTGAAAATCGATTTTATTGTGATTGTAATTCACGATATGGGAATCTTTGTAAATGTTTGCATCAACCGGAAGTTCAACCACTCAGCGTTCCACGTTTACGAAAACAAAATTATTTGAATGATCACAAAATGGAATTTAATAATAATACAAATGTGATGAAAGAAAACAACGATGAAGATGATAATTTATGCGTAGTTTGCATGGAAAATCCAAAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_488996.p1 GENE.R_Transcript_488996~~R_Transcript_488996.p1 ORF type:internal len:127 (+),score=5.52,zf-UBR|PF02207.16|3.3e-06,zf-UBR|PF02207.16|6.1e+02 R_Transcript_488996:1-378(+)
VQLPLKVCTFQYSGKNYSEQIWYYCKTCFKEQMKGVCAICSVHCHHGHDLRFGGENRFYCDCNSRYGNLCKCLHQPEVQPLSVPRLRKQNYLNDHKMEFNNNTNVMKENNDEDDNLCVVCMENPKE

Click here to download the sequence:
Link to NCBI Protein BLAST