Transcript Information: R_Transcript_489021.p2


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeHomolog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13828000723272
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.18549897687307
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16581594459771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_489021.p2 GENE.R_Transcript_489021~~R_Transcript_489021.p2 ORF type:internal len:132 (+),score=28.90,Asp|PF00026.19|2e-47,TAXi_N|PF14543.2|1.4e-07 R_Transcript_489021:3-395(+)
GATTTTGAGGATGCTCAATATTATGGACCTGTTGCAATTGGAACCCCTGCTCAAATGTTCAAGGTTGTCTTTGATACTGGTTCCTCTAACTTGTGGGTTCCAAGTTCTAAATGCTCCATCTTTGATCTTGCTTGCGATCTTCACCACAAATACGATCACGAGAAATCTTCTACCTATACTGCAAATGGAACCATCTTCAAGATCCAATACGGAAGTGGAGGAGAAATTGCAGGATTCTTGTCTGTCGATGATGTCAACATTGGAGGACTTAACATCAAGAACCAAAAGTTTGCTGAAGTAACCACCGAGAAGGGACTTTCTTGGATTGCAGCAAAGTTTGATGGTATCCTTGGATTTGCATTTCAATCCATCTCTGTTGATAACGTCACCCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_489021.p2 GENE.R_Transcript_489021~~R_Transcript_489021.p2 ORF type:internal len:132 (+),score=28.90,Asp|PF00026.19|2e-47,TAXi_N|PF14543.2|1.4e-07 R_Transcript_489021:3-395(+)
DFEDAQYYGPVAIGTPAQMFKVVFDTGSSNLWVPSSKCSIFDLACDLHHKYDHEKSSTYTANGTIFKIQYGSGGEIAGFLSVDDVNIGGLNIKNQKFAEVTTEKGLSWIAAKFDGILGFAFQSISVDNVTP

Click here to download the sequence:
Link to NCBI Protein BLAST