Transcript Information: R_Transcript_48949.p1


Annotated TAIR IDAT3G55020.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20389278-20394713 | Reverse length=777
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.673256318452
Replicate 214.570926553961
Replicate 318.049405286607
Condition 2: 8 Hour
Replicate 115.222537726239
Replicate 219.208805726223
Replicate 324.012612603837
Condition 3: 24 Hour
Replicate 124.202507619568
Replicate 221.204935656242
Replicate 321.518514487359


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_48949.p1 GENE.R_Transcript_48949~~R_Transcript_48949.p1 ORF type:complete len:830 (+),score=224.76,RabGAP-TBC|PF00566.14|9.6e-54,RabGAP-TBC|PF00566.14|2.4e+03 R_Transcript_48949:300-2789(+)
ATGAAGATGAAAACTAGTAATAGTCATAAACCTCCTACAAACCCTCTAATTACTCTTGAACATAAGAGGGATGCTTATGGATTTGCTGTCAGACCTCAGCATGTACAGAGATACAGAGAGTATGCAAACATCTACAAGGAGGAAGAAGAGGAGAGATCCGATAGATGGAAAGATTTCCTGGAACGGGTATCTGAGCCTGCTCAATTGCCTATTGATGTTTCAACAGTAGGGGAAGTTGATAAGAAAGAAGGTGTTGAAACATCTGAAGTTGATGTTGTTCATCAAGCGGAAGATAAGAAGTTTGTGAACGGCAATGAAACAGTTATTTCTGAAGGGTCAGTTGAGAATGGTTCTGGAAAGTCGCAGGGTTGGGAAGTAGAGGAGAAGAGAATTCATAAAATTCAGATATGGTCTAATATAAGGCCTTCTCTACGGAAAATAGAAGATGCCATGAGTGTTCGGGTGAAAAAGAAAAACAATGCATCAAGAAAAGGGCAGGATGCTAATTCTGAAAAGTCTCTTCATTCTGTTGAGGAATTCAAGCCTGTCAAAGGAGCACAAGAAGAGGATTCAGAAGAAGAGTTCTATGACGTTGAGAGATCAGATCCTGTTCAAGATGCCCCTCCTGTTGATAGTTCTGCCTCGCCCAGAGTAGGTGGTAATTCTGATGGAAGCAACTTGGATGCTAGTTCTCCATGGAGGGAAGAGTTGGAGGTTCTTGTCCGAGGAGGACTACCAATGGCTCTTAGGGGAGAGCTTTGGCAAGCCTTTGTGGGTATAAAGGCACGGCGTATTGACAGTTACTATCAGGATTTGTTGTCGCAAGAAAGTAATCATGTTAACAGCATAAAGCAAGAAGAAACAAATGGTAAAGAGTCAGGCGAAGAAAGTGTTGGACTACGTGAAAAATGGAAGGGGCAGATTGAAAAGGATTTACCCCGGACTTTCCCAGGGCACCCTGCTTTGGATGAGGATGGTAGAAATGCTTTAAGGCGTTTACTTATAGCATATGCTCGCCATAACCCTTCGGTTGGCTACTGTCAGGCTATGAATTTTTTTGCTGGTTTACTGTTGCTTCTAATGCCCGAGGAGAATGCTTTTTGGACTTTGATGGGTATTATGGATGACTACTTTGATGGTTATTATGCGGAAGAGATGATAGAGTGTCAGGTGGACCAATATGTTTTTGAGGAGTTGGTGCGTGAAAGGTTTCCTAAACTGGTTAATCATCTGGATTACTTGGGAGTTCAAGTAGCATGGGTCACTGGACCATGGTTCCTGTCTATATTCATGAATATGCTCCCCTGGGAAAGTGTTCTTCGAGTTTGGGACGTGCTTCTTTTCGAGGGTAGTCGTGTTATGTTGTTTAGGACTGCACTTGCACTGATGGAGCTCTACGGCCCTGCCTTGGTGACAACGAAAGATGCCGGAGATGCAGTTACTCTACTGCAATCACTGGCTGGGTCAACATTTGACAGTAGTCAACTAGTGTTGACAGCTTGCATGGGATACCAAAATGTGAATGAAGCCAGGCTACAGGAGCTAAGAGATAAACATAGACCAGCAGTAGTAGCTGCAATTGAAGAACGATCAAAGGGGCTTCAGGCTTTGAAGAATTCCCAGGGTCTTGCTTCTAAGCTATACAGTTTCAAGCATGATCCTGGATCTGTTATGGCAAACAAATCAAAAGTTGCCGATGAGCAGATGAATGGTGACACTACTCTCTTGGAATCTGGTTCCACTACACCAGATGATTACTTTATTGGCATGACTGGTGGAGCAGATATAGATCCTGGCTTAGATCTTCAAGAACAGGTTGTGTGGTTGAAGGTTGAGTTATGCAAATTGCTGGAGGAGAAAAGATCAGCAGAGCTAAGGGCTGAGGAGCTGGAGACTGCATTGATGGAAATGGTGAAGCAAGATAACCGTCGACAATTAAGTGCACAGGTTGAACAATTGGAGCAGGAGGTCTCAGAGCTCCGTCGTGCCCTAGCTGACAAGCAGGAACAAGAAAGTGCTATGATTCAGGTCCTGATGCGAGTAGAGCAAGAGCAGAAAGTAACAGAAGATGCTCGGAGATTTGCTGAACAAGAAGCAGCAACACAAAGAGAGGCTGCTCAAGTTCTTCAGGAAAAATATGAAAATGCCATGGCTTCACTTGCTGAAATGGAGAAGCGAGTGGTTATGGCAGAGTCAATGTTGGAAGCAACGTTGCAATACCAGTCTGGACAAATGAAAGCCCAGCCTTCTCCACGGTCTGTACAGAATGATTCATCATCTTTACGAAGTAGTATGGAGGCTTCAACTGAAGTTCCCCCGAGGAAAATTAGTCTGCTGGCTAGACCATTTGGACTTGGATGGCGTGATAAGAGCAAGGGAAAACCAGCAAACACTGACGAGCCAACCGACAGTAACCTTACAGATGAGATACAAAGCCCAGGTGTTCAGCACACAGACAGTAACGACGATCAAGATTCAGACAAACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_48949.p1 GENE.R_Transcript_48949~~R_Transcript_48949.p1 ORF type:complete len:830 (+),score=224.76,RabGAP-TBC|PF00566.14|9.6e-54,RabGAP-TBC|PF00566.14|2.4e+03 R_Transcript_48949:300-2789(+)
MKMKTSNSHKPPTNPLITLEHKRDAYGFAVRPQHVQRYREYANIYKEEEEERSDRWKDFLERVSEPAQLPIDVSTVGEVDKKEGVETSEVDVVHQAEDKKFVNGNETVISEGSVENGSGKSQGWEVEEKRIHKIQIWSNIRPSLRKIEDAMSVRVKKKNNASRKGQDANSEKSLHSVEEFKPVKGAQEEDSEEEFYDVERSDPVQDAPPVDSSASPRVGGNSDGSNLDASSPWREELEVLVRGGLPMALRGELWQAFVGIKARRIDSYYQDLLSQESNHVNSIKQEETNGKESGEESVGLREKWKGQIEKDLPRTFPGHPALDEDGRNALRRLLIAYARHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLMGIMDDYFDGYYAEEMIECQVDQYVFEELVRERFPKLVNHLDYLGVQVAWVTGPWFLSIFMNMLPWESVLRVWDVLLFEGSRVMLFRTALALMELYGPALVTTKDAGDAVTLLQSLAGSTFDSSQLVLTACMGYQNVNEARLQELRDKHRPAVVAAIEERSKGLQALKNSQGLASKLYSFKHDPGSVMANKSKVADEQMNGDTTLLESGSTTPDDYFIGMTGGADIDPGLDLQEQVVWLKVELCKLLEEKRSAELRAEELETALMEMVKQDNRRQLSAQVEQLEQEVSELRRALADKQEQESAMIQVLMRVEQEQKVTEDARRFAEQEAATQREAAQVLQEKYENAMASLAEMEKRVVMAESMLEATLQYQSGQMKAQPSPRSVQNDSSSLRSSMEASTEVPPRKISLLARPFGLGWRDKSKGKPANTDEPTDSNLTDEIQSPGVQHTDSNDDQDSDKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST